Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF578

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
250,415	+		GFF578	0.46	-0.1
250,415	+		GFF578	0.46	+0.8
250,415	+		GFF578	0.46	+0.3
250,415	+		GFF578	0.46	+0.4
250,415	+		GFF578	0.46	+0.4
250,415	+		GFF578	0.46	-0.1
250,415	+		GFF578	0.46	-0.5
250,416	-		GFF578	0.46	-0.9
250,416	-		GFF578	0.46	-0.8
250,416	-		GFF578	0.46	+0.9
250,416	-		GFF578	0.46	+1.5
250,416	-		GFF578	0.46	-0.4
250,416	-		GFF578	0.46	-0.5
250,416	-		GFF578	0.46	+0.2
250,416	-		GFF578	0.46	-1.4
250,502	+		GFF578	0.59	-1.1
250,503	-		GFF578	0.59	-1.5
250,503	-		GFF578	0.59	+0.7
250,706	+				-0.7
250,706	+				-0.2
250,706	+				-0.3
250,706	+				-0.7
250,707	-				+1.5
250,746	-				+0.5