Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5658

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
2,680,021	+		GFF5657	0.21	-1.3
2,680,579	+		GFF5657	0.67	-0.1
2,680,849	+		GFF5657	0.89	-0.1
2,680,849	+		GFF5657	0.89	+0.0
2,681,301	+		GFF5658	0.19	+0.6
2,681,436	+		GFF5658	0.27	-0.4
2,682,720	-				-1.0
2,682,974	+		GFF5659	0.25	-0.4
2,682,984	-		GFF5659	0.25	-0.3
2,682,984	-		GFF5659	0.25	+1.2
2,682,984	-		GFF5659	0.25	+0.0
2,682,989	+		GFF5659	0.26	-0.6
2,682,989	+		GFF5659	0.26	-0.2
2,683,163	+		GFF5659	0.39	-0.6