Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5305

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
2,315,646	-				-0.1
2,315,660	+				+0.9
2,315,661	-				-1.4
2,316,563	-		GFF5304	0.81	+0.0
2,316,571	+		GFF5304	0.84	+0.6
2,316,571	+		GFF5304	0.84	+0.6
2,316,667	+				-0.6
2,316,928	+		GFF5305	0.71	-0.2
2,317,461	-				-0.3
2,317,502	-				-0.7
2,317,782	+		GFF5308	0.23	+0.4
2,317,783	-		GFF5308	0.24	-1.3
2,318,051	+		GFF5309	0.18	-0.0