Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3722

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
614,632	+		GFF3721	0.43	+0.2
614,633	-		GFF3721	0.43	-0.3
614,875	+		GFF3721	0.67	+0.0
614,924	-		GFF3721	0.72	-0.3
615,211	-				-0.2
615,364	-		GFF3722	0.13	+0.9
615,705	+		GFF3722	0.41	+0.2
615,705	+		GFF3722	0.41	+0.2
615,706	-		GFF3722	0.41	-0.5
615,867	+		GFF3722	0.54	-0.0
616,743	-		GFF3723	0.28	-0.2
616,794	-		GFF3723	0.33	+1.0
616,794	-		GFF3723	0.33	+0.7
616,794	-		GFF3723	0.33	+0.2
616,859	+		GFF3723	0.39	-0.1
616,859	+		GFF3723	0.39	-0.5