Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2210

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
1,098,462	-		GFF2209	0.23	+0.3
1,098,603	-		GFF2209	0.37	+1.5
1,098,645	-		GFF2209	0.41	+1.5
1,098,905	-		GFF2209	0.67	+1.4
1,099,358	+				+1.0
1,099,707	+		GFF2210	0.32	-0.2
1,099,707	+		GFF2210	0.32	+0.3
1,099,708	-		GFF2210	0.32	+0.5
1,100,052	+		GFF2210	0.55	+2.0
1,100,367	+		GFF2210	0.76	-0.1
1,100,367	+		GFF2210	0.76	+0.1
1,100,367	+		GFF2210	0.76	+0.4
1,100,368	-		GFF2210	0.76	-0.3
1,100,368	-		GFF2210	0.76	-0.3
1,100,373	+		GFF2210	0.77	+1.3
1,100,373	+		GFF2210	0.77	+0.8
1,100,373	+		GFF2210	0.77	+0.0
1,100,374	-		GFF2210	0.77	+2.4
1,100,762	+				-0.2
1,100,762	+				-0.3
1,100,762	+				-0.0
1,100,895	-		GFF2211	0.12	-0.2
1,101,069	-		GFF2211	0.22	-0.2
1,101,089	+		GFF2211	0.23	-0.2
1,101,513	-		GFF2211	0.48	+0.1