Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2124

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
1,013,262	+				-0.6
1,013,263	-				+0.2
1,013,263	-				+0.6
1,013,482	+				-0.6
1,013,483	-				-0.3
1,013,483	-				+0.1
1,013,504	+				-0.4
1,013,522	+				-0.0
1,013,522	+				-0.0
1,013,522	+				-1.3
1,013,522	+				-0.2
1,013,522	+				-0.1
1,013,522	+				+0.0
1,013,523	-				+0.3
1,013,523	-				-0.9
1,013,523	-				+0.8
1,013,646	+				-0.6
1,013,646	+				+0.3
1,013,646	+				+0.2
1,013,646	+				-0.4
1,013,646	+				-0.6
1,013,646	+				-0.3
1,013,647	-				-0.4
1,013,647	-				+0.5
1,013,647	-				-0.4
1,013,647	-				-0.8
1,013,647	-				+0.3
1,013,647	-				-0.5
1,013,647	-				+1.9
1,013,647	-				-0.8
1,013,790	+		GFF2122	0.70	+0.7
1,013,790	+		GFF2122	0.70	-0.1
1,013,790	+		GFF2122	0.70	+0.2
1,013,790	+		GFF2122	0.70	+1.0
1,013,790	+		GFF2122	0.70	-0.4
1,013,790	+		GFF2122	0.70	-0.7
1,013,791	-		GFF2122	0.70	-0.5
1,013,791	-		GFF2122	0.70	-1.8
1,013,860	+				-0.1
1,013,860	+				+0.0
1,013,860	+				-1.2
1,013,860	+				+0.6
1,013,861	-				-0.0
1,013,861	-				+0.1
1,013,986	+		GFF2123	0.40	-0.3
1,013,986	+		GFF2123	0.40	-0.6
1,014,062	-		GFF2123	0.70	-1.0
1,014,062	-		GFF2123	0.70	+0.2
1,014,147	+				-0.4
1,014,148	-				-1.2
1,014,148	-				+0.3
1,014,582	+		GFF2124	0.43	+1.3
1,014,582	+		GFF2124	0.43	+0.8
1,014,583	-		GFF2124	0.43	-0.1
1,014,583	-		GFF2124	0.43	-1.1
1,014,597	+		GFF2124	0.44	+0.6
1,014,837	+		GFF2124	0.67	+0.5
1,014,837	+		GFF2124	0.67	-0.0
1,014,837	+		GFF2124	0.67	+1.4
1,014,837	+		GFF2124	0.67	+0.9
1,014,837	+		GFF2124	0.67	-1.4
1,014,837	+		GFF2124	0.67	+0.8
1,014,838	-		GFF2124	0.68	+1.7
1,014,838	-		GFF2124	0.68	-0.2
1,014,838	-		GFF2124	0.68	+0.3
1,014,838	-		GFF2124	0.68	-0.2
1,014,838	-		GFF2124	0.68	+0.3
1,014,838	-		GFF2124	0.68	-0.3
1,014,838	-		GFF2124	0.68	+0.1
1,014,838	-		GFF2124	0.68	+0.0
1,014,838	-		GFF2124	0.68	+0.2
1,014,838	-		GFF2124	0.68	-2.1
1,014,838	-		GFF2124	0.68	+0.6
1,015,178	+				-0.3
1,015,178	+				+0.6
1,015,179	-				+0.5
1,015,450	+		GFF2125	0.25	-0.8
1,015,450	+		GFF2125	0.25	-0.8
1,015,450	+		GFF2125	0.25	-0.2
1,015,451	-		GFF2125	0.25	-0.4
1,015,451	-		GFF2125	0.25	-0.6
1,015,451	-		GFF2125	0.25	+0.1
1,015,514	+		GFF2125	0.31	-0.7
1,015,514	+		GFF2125	0.31	-0.3
1,015,515	-		GFF2125	0.31	+0.6
1,015,515	-		GFF2125	0.31	+0.4
1,015,515	-		GFF2125	0.31	+0.1
1,015,916	+		GFF2125	0.67	-0.1
1,015,916	+		GFF2125	0.67	-0.3
1,015,916	+		GFF2125	0.67	+0.2
1,015,916	+		GFF2125	0.67	-0.3
1,015,916	+		GFF2125	0.67	+1.1
1,015,916	+		GFF2125	0.67	-0.5
1,015,917	-		GFF2125	0.67	-0.6
1,015,917	-		GFF2125	0.67	+0.2
1,015,917	-		GFF2125	0.67	+0.6
1,015,917	-		GFF2125	0.67	-0.2
1,015,917	-		GFF2125	0.67	-0.1
1,015,956	-		GFF2125	0.71	+0.9
1,015,956	-		GFF2125	0.71	-1.4
1,016,021	+		GFF2125	0.77	-0.2
1,016,021	+		GFF2125	0.77	+0.6
1,016,022	-		GFF2125	0.77	-0.1