Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF190

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
202,685	+		GFF189	0.89	+1.3
202,685	+		GFF189	0.89	+1.3
202,686	-		GFF189	0.89	+0.5
202,961	+				-0.4
202,962	-				-0.0
203,643	-		GFF190	0.47	+0.1
203,888	+		GFF190	0.61	-0.1
203,888	+		GFF190	0.61	-0.6
203,930	+		GFF190	0.64	+0.1
203,930	+		GFF190	0.64	-0.5
203,930	+		GFF190	0.64	-0.1
203,931	-		GFF190	0.64	-0.3
204,108	-		GFF190	0.74	+0.1
204,108	-		GFF190	0.74	-0.6
204,560	+				+1.3
204,561	-				-0.0
204,561	-				+0.1
204,561	-				+0.4
204,561	-				-0.3
204,581	+				-0.4
204,582	-				+0.8
204,628	+				-0.7
204,944	+		GFF191	0.31	-0.9
204,945	-		GFF191	0.31	+0.3
205,089	-		GFF191	0.47	+0.1
205,089	-		GFF191	0.47	+0.3