Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF10

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
6,592	+				+0.5
6,592	+				-0.7
6,592	+				+0.2
6,593	-				+0.4
6,593	-				+0.7
6,658	+		GFF9	0.16	+0.1
6,658	+		GFF9	0.16	-0.4
6,659	-		GFF9	0.17	-0.7
6,659	-		GFF9	0.17	-1.7
6,685	+		GFF9	0.20	-0.2
6,686	-		GFF9	0.20	+0.7
6,709	+		GFF9	0.23	+0.1
6,710	-		GFF9	0.23	+0.5
6,710	-		GFF9	0.23	+0.3
6,940	+		GFF9	0.53	+0.1
6,940	+		GFF9	0.53	-0.4
6,941	-		GFF9	0.53	-0.1
6,941	-		GFF9	0.53	-0.5
6,941	-		GFF9	0.53	+0.1
6,941	-		GFF9	0.53	-0.9
7,486	+		GFF10	0.15	+1.1
7,487	-		GFF10	0.15	-0.8
7,615	+		GFF10	0.25	+0.1
7,828	+		GFF10	0.43	+0.2
8,201	-		GFF10	0.74	-0.8
8,224	+		GFF10	0.76	-0.2
8,225	-		GFF10	0.76	-0.3
8,443	+				-0.1
8,507	-				+0.9