Strain Fitness in Escherichia fergusonii Becca around EFB2_02287

Experiment: BHIS no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with 14 member community plus Klebsiella pneumoniae
2,420,640	-		EFB2_02285	0.54	-2.1
2,420,666	+		EFB2_02285	0.55	-0.7
2,420,667	-		EFB2_02285	0.55	+0.2
2,420,686	+		EFB2_02285	0.57	+0.6
2,420,686	+		EFB2_02285	0.57	+0.4
2,420,686	+		EFB2_02285	0.57	-0.6
2,420,686	+		EFB2_02285	0.57	-1.7
2,420,711	+		EFB2_02285	0.58	-1.5
2,420,751	+		EFB2_02285	0.61	+0.7
2,420,819	+		EFB2_02285	0.66	-2.4
2,420,819	+		EFB2_02285	0.66	-0.6
2,420,819	+		EFB2_02285	0.66	-0.7
2,420,819	+		EFB2_02285	0.66	-0.5
2,420,819	+		EFB2_02285	0.66	+1.2
2,420,819	+		EFB2_02285	0.66	+1.0
2,420,819	+		EFB2_02285	0.66	+0.9
2,420,843	+		EFB2_02285	0.68	-0.2
2,420,843	+		EFB2_02285	0.68	+0.1
2,420,904	+		EFB2_02285	0.72	-0.1
2,420,908	+		EFB2_02285	0.72	-2.6
2,420,908	+		EFB2_02285	0.72	+0.9
2,420,909	-		EFB2_02285	0.72	+1.3
2,420,909	-		EFB2_02285	0.72	-1.0
2,420,916	+		EFB2_02285	0.73	-1.3
2,420,916	+		EFB2_02285	0.73	-0.7
2,420,948	+		EFB2_02285	0.75	-1.5
2,420,949	-		EFB2_02285	0.75	+0.4
2,420,950	+		EFB2_02285	0.75	+0.2
2,420,950	+		EFB2_02285	0.75	+0.6
2,421,006	+		EFB2_02285	0.79	+0.5
2,421,006	+		EFB2_02285	0.79	-2.0
2,421,019	+		EFB2_02285	0.80	+1.0
2,421,020	-		EFB2_02285	0.80	-1.0
2,421,187	+				+0.9
2,421,187	+				+1.8
2,421,187	+				-2.5
2,421,187	+				-2.4
2,421,187	+				+0.4
2,421,187	+				+0.6
2,421,188	-				-0.1
2,421,188	-				+2.5
2,421,188	-				-2.8
2,421,251	+				-1.5
2,421,251	+				+0.1
2,421,251	+				+1.5
2,421,251	+				-0.3
2,421,251	+				+3.1
2,421,251	+				+0.3
2,421,251	+				-1.6
2,421,251	+				-0.1
2,421,251	+				-0.1
2,421,251	+				+1.8
2,421,251	+				-0.9
2,421,251	+				-0.1
2,421,251	+				-0.3
2,421,251	+				+0.7
2,421,251	+				-0.4
2,421,251	+				-1.3
2,421,251	+				+2.0
2,421,251	+				+0.0
2,421,252	-				-2.1
2,421,252	-				+0.9
2,421,252	-				+0.5
2,421,252	-				+2.0
2,421,252	-				-1.1
2,421,252	-				-0.4
2,421,252	-				+0.2
2,421,252	-				-0.3
2,421,252	-				+0.8
2,421,252	-				+1.0
2,421,252	-				-0.4
2,421,252	-				+1.8
2,421,306	-				+0.7
2,421,306	-				-0.1
2,421,312	+				+1.4
2,421,312	+				-0.7
2,421,312	+				-2.2
2,421,313	-				+1.0
2,421,313	-				+0.5
2,421,313	-				+0.9
2,421,347	-		EFB2_02286	0.19	+2.7
2,421,357	+		EFB2_02286	0.24	+0.9
2,421,357	+		EFB2_02286	0.24	+0.4
2,421,358	-		EFB2_02286	0.24	+2.5
2,421,358	-		EFB2_02286	0.24	+1.9
2,421,358	-		EFB2_02286	0.24	+0.7
2,421,401	+		EFB2_02286	0.47	-0.4
2,421,401	+		EFB2_02286	0.47	+1.0
2,421,401	+		EFB2_02286	0.47	+1.1
2,421,401	+		EFB2_02286	0.47	-2.3
2,421,401	+		EFB2_02286	0.47	-0.5
2,421,401	+		EFB2_02286	0.47	+2.3
2,421,402	-		EFB2_02286	0.47	+0.5
2,421,402	-		EFB2_02286	0.47	+2.0
2,421,402	-		EFB2_02286	0.47	-0.4
2,421,402	-		EFB2_02286	0.47	-2.3
2,421,418	+		EFB2_02286	0.56	+2.5
2,421,419	-		EFB2_02286	0.56	-0.1
2,421,488	-				+1.8
2,421,493	+				-1.0
2,421,493	+				-1.0
2,421,494	-				-0.7
2,421,494	-				-0.8
2,421,494	-				-0.4
2,421,494	-				+1.5
2,421,494	-				-1.3
2,421,494	-				+0.3
2,421,521	-				-1.3
2,421,525	-				-0.2
2,421,525	-				-0.6
2,421,537	+				-1.1
2,421,538	-				+2.7
2,421,572	-				-2.6
2,421,645	+				+4.5
2,421,645	+				-0.8
2,421,646	-				-0.7
2,421,649	+				+0.3
2,421,650	-				+0.9
2,421,685	-				-0.4
2,421,725	+				-1.4
2,421,725	+				-0.8
2,421,725	+				+2.5
2,421,726	-				-1.0
2,421,726	-				-0.7
2,421,726	-				-1.8
2,421,726	-				-2.4
2,421,832	-		EFB2_02287	0.19	+0.4
2,421,832	-		EFB2_02287	0.19	-0.6
2,421,832	-		EFB2_02287	0.19	-2.6
2,421,832	-		EFB2_02287	0.19	-0.4
2,421,832	-		EFB2_02287	0.19	-0.5
2,421,832	-		EFB2_02287	0.19	+0.3
2,421,832	-		EFB2_02287	0.19	+0.3
2,421,832	-		EFB2_02287	0.19	-1.2
2,421,832	-		EFB2_02287	0.19	+0.4
2,421,876	+		EFB2_02287	0.23	+3.3
2,421,876	+		EFB2_02287	0.23	+0.8
2,421,877	-		EFB2_02287	0.23	+1.3
2,421,963	-		EFB2_02287	0.31	-0.5
2,421,963	-		EFB2_02287	0.31	+0.5
2,421,963	-		EFB2_02287	0.31	+1.5
2,421,987	+		EFB2_02287	0.34	+0.6
2,421,987	+		EFB2_02287	0.34	+0.9
2,421,987	+		EFB2_02287	0.34	-1.0
2,421,987	+		EFB2_02287	0.34	-0.1
2,421,987	+		EFB2_02287	0.34	-0.2
2,421,987	+		EFB2_02287	0.34	+0.2
2,421,988	-		EFB2_02287	0.34	-0.8
2,421,988	-		EFB2_02287	0.34	-2.9
2,421,988	-		EFB2_02287	0.34	+1.1
2,421,990	+		EFB2_02287	0.34	+0.4
2,421,990	+		EFB2_02287	0.34	-2.3
2,421,990	+		EFB2_02287	0.34	-0.8
2,421,990	+		EFB2_02287	0.34	-1.1
2,421,990	+		EFB2_02287	0.34	-1.6
2,421,990	+		EFB2_02287	0.34	+1.1
2,421,990	+		EFB2_02287	0.34	+0.5
2,421,991	-		EFB2_02287	0.34	+0.2
2,421,991	-		EFB2_02287	0.34	-1.1
2,421,991	-		EFB2_02287	0.34	-2.4
2,421,991	-		EFB2_02287	0.34	+1.1
2,421,991	-		EFB2_02287	0.34	-2.0
2,421,991	-		EFB2_02287	0.34	+1.3
2,421,991	-		EFB2_02287	0.34	-0.3
2,421,991	-		EFB2_02287	0.34	+0.6
2,421,991	-		EFB2_02287	0.34	+2.3
2,421,991	-		EFB2_02287	0.34	-2.1
2,421,991	-		EFB2_02287	0.34	-1.6
2,421,991	-		EFB2_02287	0.34	-0.7
2,422,001	+		EFB2_02287	0.35	+1.5
2,422,001	+		EFB2_02287	0.35	+0.3
2,422,022	+		EFB2_02287	0.37	+1.6
2,422,022	+		EFB2_02287	0.37	-1.0
2,422,022	+		EFB2_02287	0.37	+0.5
2,422,022	+		EFB2_02287	0.37	+1.5
2,422,022	+		EFB2_02287	0.37	-1.3
2,422,023	-		EFB2_02287	0.37	-1.2
2,422,023	-		EFB2_02287	0.37	-0.1
2,422,062	+		EFB2_02287	0.41	-1.5
2,422,062	+		EFB2_02287	0.41	+1.9
2,422,062	+		EFB2_02287	0.41	+0.4
2,422,062	+		EFB2_02287	0.41	-0.7
2,422,062	+		EFB2_02287	0.41	-0.5
2,422,062	+		EFB2_02287	0.41	+2.5
2,422,062	+		EFB2_02287	0.41	+2.5
2,422,062	+		EFB2_02287	0.41	-0.1
2,422,063	-		EFB2_02287	0.41	+0.9
2,422,063	-		EFB2_02287	0.41	-2.5
2,422,063	-		EFB2_02287	0.41	+1.9
2,422,063	-		EFB2_02287	0.41	+1.4
2,422,063	-		EFB2_02287	0.41	+1.8
2,422,063	-		EFB2_02287	0.41	-0.8
2,422,063	-		EFB2_02287	0.41	-0.2
2,422,086	+		EFB2_02287	0.43	-1.1
2,422,188	+		EFB2_02287	0.53	-0.8
2,422,188	+		EFB2_02287	0.53	+0.5
2,422,188	+		EFB2_02287	0.53	-0.6
2,422,189	-		EFB2_02287	0.53	+1.9
2,422,189	-		EFB2_02287	0.53	+2.1
2,422,189	-		EFB2_02287	0.53	+0.8
2,422,189	-		EFB2_02287	0.53	+0.0
2,422,189	-		EFB2_02287	0.53	+0.9
2,422,189	-		EFB2_02287	0.53	-2.5
2,422,189	-		EFB2_02287	0.53	+1.0
2,422,189	-		EFB2_02287	0.53	-0.8
2,422,189	-		EFB2_02287	0.53	-0.1
2,422,217	-		EFB2_02287	0.56	-1.7
2,422,227	+		EFB2_02287	0.57	+1.6
2,422,227	+		EFB2_02287	0.57	+1.3
2,422,286	-		EFB2_02287	0.62	-0.9
2,422,286	-		EFB2_02287	0.62	+1.9
2,422,286	-		EFB2_02287	0.62	+0.4
2,422,298	-		EFB2_02287	0.63	-0.1
2,422,328	-		EFB2_02287	0.66	-0.0
2,422,335	-		EFB2_02287	0.67	-1.6
2,422,338	+		EFB2_02287	0.67	-2.0
2,422,339	-		EFB2_02287	0.67	-0.3
2,422,345	+		EFB2_02287	0.68	-0.8
2,422,346	-		EFB2_02287	0.68	-0.3
2,422,404	-		EFB2_02287	0.74	-0.5
2,422,414	+		EFB2_02287	0.74	+0.9
2,422,470	-		EFB2_02287	0.80	+1.5
2,422,513	-		EFB2_02287	0.84	-0.8
2,422,530	+		EFB2_02287	0.86	+0.9
2,422,531	-		EFB2_02287	0.86	-0.1
2,422,531	-		EFB2_02287	0.86	+0.6
2,422,648	-				-0.1
2,422,657	-				-1.1
2,422,681	+				-2.0
2,422,681	+				-1.8
2,422,681	+				-2.2
2,422,681	+				+0.4
2,422,682	-				-0.1
2,422,682	-				-1.6
2,422,682	-				-3.3
2,422,682	-				-0.4
2,422,682	-				-1.9
2,422,682	-				-1.5
2,422,708	-				-0.6
2,422,708	-				+0.2
2,422,743	+				-0.5
2,422,743	+				+0.5
2,422,822	+				+1.0
2,422,823	-				+0.9
2,422,823	-				+1.9
2,422,841	+				-0.3
2,422,895	-				-0.6
2,422,901	+				-1.0
2,422,902	-				-2.0
2,422,909	-				-1.9
2,422,909	-				-2.7
2,422,909	-				+1.3
2,423,110	-		EFB2_02288	0.33	+2.3
2,423,121	+		EFB2_02288	0.34	-0.2
2,423,122	-		EFB2_02288	0.34	+1.2
2,423,122	-		EFB2_02288	0.34	+1.7
2,423,129	+		EFB2_02288	0.35	-2.0
2,423,166	-		EFB2_02288	0.39	-0.4
2,423,185	-		EFB2_02288	0.42	-0.0
2,423,185	-		EFB2_02288	0.42	+0.2
2,423,244	+		EFB2_02288	0.49	+1.7
2,423,268	-		EFB2_02288	0.52	+1.3
2,423,268	-		EFB2_02288	0.52	+0.2
2,423,268	-		EFB2_02288	0.52	+1.0
2,423,294	+		EFB2_02288	0.55	-0.3
2,423,294	+		EFB2_02288	0.55	+0.2
2,423,294	+		EFB2_02288	0.55	-1.5
2,423,294	+		EFB2_02288	0.55	+1.5
2,423,295	-		EFB2_02288	0.55	-1.5
2,423,295	-		EFB2_02288	0.55	-0.1
2,423,295	-		EFB2_02288	0.55	+0.5
2,423,295	-		EFB2_02288	0.55	+0.8
2,423,298	+		EFB2_02288	0.55	+0.2
2,423,298	+		EFB2_02288	0.55	+0.9
2,423,298	+		EFB2_02288	0.55	+0.2
2,423,299	-		EFB2_02288	0.55	-1.4
2,423,307	+		EFB2_02288	0.56	+0.6
2,423,308	-		EFB2_02288	0.56	-0.3
2,423,308	-		EFB2_02288	0.56	+0.2
2,423,308	-		EFB2_02288	0.56	-0.7
2,423,308	-		EFB2_02288	0.56	-1.6
2,423,328	+		EFB2_02288	0.59	+0.6
2,423,329	-		EFB2_02288	0.59	-0.3
2,423,329	-		EFB2_02288	0.59	-0.9
2,423,371	+		EFB2_02288	0.64	-0.4
2,423,372	-		EFB2_02288	0.64	+0.1
2,423,431	-		EFB2_02288	0.71	+2.5
2,423,459	+		EFB2_02288	0.75	+0.0
2,423,460	-		EFB2_02288	0.75	-2.2
2,423,460	-		EFB2_02288	0.75	+2.2
2,423,460	-		EFB2_02288	0.75	+2.4
2,423,492	+		EFB2_02288	0.79	-0.7
2,423,556	+		EFB2_02288	0.86	+2.3
2,423,556	+		EFB2_02288	0.86	+1.5
2,423,556	+		EFB2_02288	0.86	-0.4
2,423,556	+		EFB2_02288	0.86	+0.5
2,423,557	-		EFB2_02288	0.86	+1.9
2,423,557	-		EFB2_02288	0.86	+0.5
2,423,557	-		EFB2_02288	0.86	-2.1
2,423,568	+		EFB2_02288	0.88	+0.7
2,423,602	+				+1.2
2,423,603	-				-2.6