Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05307

Experiment: b-Glucan from Oat 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_05306 and BACOVA_05307 are separated by 75 nucleotidesBACOVA_05307 and BACOVA_05308 are separated by 120 nucleotidesBACOVA_05308 and BACOVA_05309 are separated by 115 nucleotides BACOVA_05306: BACOVA_05306 - pseudouridine synthase, RluA family, at 795,228 to 796,922 _05306 BACOVA_05307: BACOVA_05307 - hypothetical protein, at 796,998 to 797,525 _05307 BACOVA_05308: BACOVA_05308 - MaoC-like protein, at 797,646 to 798,110 _05308 BACOVA_05309: BACOVA_05309 - linear amide C-N hydrolase, choloylglycine hydrolase family protein, at 798,226 to 799,170 _05309 Position (kb) 796 797 798Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 796.059 kb on + strand, within BACOVA_05306at 796.072 kb on + strand, within BACOVA_05306at 796.073 kb on - strand, within BACOVA_05306at 796.073 kb on - strand, within BACOVA_05306at 796.078 kb on + strand, within BACOVA_05306at 796.092 kb on - strand, within BACOVA_05306at 796.158 kb on + strand, within BACOVA_05306at 796.159 kb on - strand, within BACOVA_05306at 796.398 kb on - strand, within BACOVA_05306at 796.519 kb on + strand, within BACOVA_05306at 796.566 kb on + strand, within BACOVA_05306at 796.567 kb on - strand, within BACOVA_05306at 796.567 kb on - strand, within BACOVA_05306at 796.633 kb on + strand, within BACOVA_05306at 796.633 kb on + strand, within BACOVA_05306at 796.712 kb on + strand, within BACOVA_05306at 796.713 kb on - strand, within BACOVA_05306at 796.725 kb on - strand, within BACOVA_05306at 796.770 kb on + strandat 796.770 kb on + strandat 796.850 kb on + strandat 796.851 kb on - strandat 796.917 kb on + strandat 796.918 kb on - strandat 796.918 kb on - strandat 796.929 kb on - strandat 796.930 kb on + strandat 796.931 kb on - strandat 796.932 kb on + strandat 796.932 kb on + strandat 796.933 kb on - strandat 796.934 kb on + strandat 796.935 kb on - strandat 796.935 kb on - strandat 796.950 kb on + strandat 796.951 kb on - strandat 796.982 kb on + strandat 796.983 kb on - strandat 797.003 kb on + strandat 797.003 kb on + strandat 797.003 kb on + strandat 797.003 kb on + strandat 797.100 kb on + strand, within BACOVA_05307at 797.128 kb on - strand, within BACOVA_05307at 797.192 kb on + strand, within BACOVA_05307at 797.217 kb on - strand, within BACOVA_05307at 797.277 kb on + strand, within BACOVA_05307at 797.300 kb on + strand, within BACOVA_05307at 797.300 kb on + strand, within BACOVA_05307at 797.307 kb on + strand, within BACOVA_05307at 797.308 kb on - strand, within BACOVA_05307at 797.316 kb on + strand, within BACOVA_05307at 797.317 kb on - strand, within BACOVA_05307at 797.403 kb on - strand, within BACOVA_05307at 797.482 kb on - strandat 797.534 kb on + strandat 797.535 kb on - strandat 797.538 kb on + strandat 797.538 kb on + strandat 797.556 kb on + strandat 797.576 kb on + strandat 797.577 kb on - strandat 797.617 kb on - strandat 797.617 kb on - strandat 797.620 kb on + strandat 797.621 kb on - strandat 797.692 kb on + strandat 797.692 kb on + strandat 797.704 kb on + strand, within BACOVA_05308at 797.742 kb on - strand, within BACOVA_05308at 797.788 kb on + strand, within BACOVA_05308at 797.789 kb on - strand, within BACOVA_05308at 797.809 kb on + strand, within BACOVA_05308at 797.810 kb on - strand, within BACOVA_05308at 797.813 kb on + strand, within BACOVA_05308at 797.826 kb on - strand, within BACOVA_05308at 797.826 kb on - strand, within BACOVA_05308at 797.869 kb on - strand, within BACOVA_05308at 797.894 kb on - strand, within BACOVA_05308at 797.897 kb on + strand, within BACOVA_05308at 797.898 kb on - strand, within BACOVA_05308at 797.919 kb on + strand, within BACOVA_05308at 797.920 kb on - strand, within BACOVA_05308at 797.920 kb on - strand, within BACOVA_05308at 797.954 kb on - strand, within BACOVA_05308at 797.984 kb on + strand, within BACOVA_05308at 798.088 kb on + strandat 798.089 kb on - strandat 798.096 kb on + strandat 798.159 kb on - strandat 798.313 kb on - strandat 798.316 kb on + strandat 798.316 kb on + strandat 798.317 kb on - strandat 798.375 kb on + strand, within BACOVA_05309at 798.375 kb on + strand, within BACOVA_05309at 798.379 kb on - strand, within BACOVA_05309at 798.405 kb on - strand, within BACOVA_05309at 798.482 kb on + strand, within BACOVA_05309at 798.496 kb on - strand, within BACOVA_05309at 798.514 kb on + strand, within BACOVA_05309

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Per-strain Table

Position Strand Gene LocusTag Fraction b-Glucan from Oat 2.5 mg/mL (C)
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796,059 + BACOVA_05306 0.49 +0.7
796,072 + BACOVA_05306 0.50 +1.8
796,073 - BACOVA_05306 0.50 -1.8
796,073 - BACOVA_05306 0.50 +0.5
796,078 + BACOVA_05306 0.50 +0.5
796,092 - BACOVA_05306 0.51 +0.0
796,158 + BACOVA_05306 0.55 -0.3
796,159 - BACOVA_05306 0.55 -1.4
796,398 - BACOVA_05306 0.69 -0.2
796,519 + BACOVA_05306 0.76 -1.1
796,566 + BACOVA_05306 0.79 -0.7
796,567 - BACOVA_05306 0.79 +0.3
796,567 - BACOVA_05306 0.79 +2.6
796,633 + BACOVA_05306 0.83 -0.6
796,633 + BACOVA_05306 0.83 -0.6
796,712 + BACOVA_05306 0.88 +0.9
796,713 - BACOVA_05306 0.88 -0.4
796,725 - BACOVA_05306 0.88 -1.8
796,770 + +0.7
796,770 + +0.8
796,850 + -1.1
796,851 - -0.2
796,917 + +1.1
796,918 - -0.4
796,918 - +0.8
796,929 - -2.9
796,930 + -0.8
796,931 - -3.0
796,932 + +0.1
796,932 + -0.7
796,933 - +0.7
796,934 + +0.6
796,935 - -0.8
796,935 - -0.5
796,950 + -0.9
796,951 - -1.6
796,982 + +0.3
796,983 - -0.4
797,003 + +0.4
797,003 + -0.2
797,003 + -0.4
797,003 + -0.3
797,100 + BACOVA_05307 0.19 -1.0
797,128 - BACOVA_05307 0.25 -1.2
797,192 + BACOVA_05307 0.37 +0.4
797,217 - BACOVA_05307 0.41 -0.2
797,277 + BACOVA_05307 0.53 +1.4
797,300 + BACOVA_05307 0.57 +0.6
797,300 + BACOVA_05307 0.57 -0.7
797,307 + BACOVA_05307 0.59 -0.1
797,308 - BACOVA_05307 0.59 +0.4
797,316 + BACOVA_05307 0.60 +1.4
797,317 - BACOVA_05307 0.60 +1.9
797,403 - BACOVA_05307 0.77 +0.5
797,482 - +1.4
797,534 + -1.6
797,535 - +0.3
797,538 + -0.9
797,538 + +3.5
797,556 + -0.8
797,576 + -1.8
797,577 - +1.3
797,617 - -0.6
797,617 - -1.4
797,620 + +1.2
797,621 - -0.1
797,692 + -0.2
797,692 + -1.3
797,704 + BACOVA_05308 0.12 -0.4
797,742 - BACOVA_05308 0.21 -0.8
797,788 + BACOVA_05308 0.31 +0.3
797,789 - BACOVA_05308 0.31 -0.2
797,809 + BACOVA_05308 0.35 -1.2
797,810 - BACOVA_05308 0.35 +0.5
797,813 + BACOVA_05308 0.36 -2.3
797,826 - BACOVA_05308 0.39 +0.3
797,826 - BACOVA_05308 0.39 +0.1
797,869 - BACOVA_05308 0.48 +0.2
797,894 - BACOVA_05308 0.53 -0.6
797,897 + BACOVA_05308 0.54 -1.1
797,898 - BACOVA_05308 0.54 +1.5
797,919 + BACOVA_05308 0.59 +0.5
797,920 - BACOVA_05308 0.59 -0.6
797,920 - BACOVA_05308 0.59 +0.0
797,954 - BACOVA_05308 0.66 +0.0
797,984 + BACOVA_05308 0.73 +0.4
798,088 + +0.1
798,089 - +0.9
798,096 + -0.6
798,159 - +1.4
798,313 - +0.8
798,316 + -1.6
798,316 + +1.2
798,317 - +1.3
798,375 + BACOVA_05309 0.16 -1.1
798,375 + BACOVA_05309 0.16 -1.1
798,379 - BACOVA_05309 0.16 +0.4
798,405 - BACOVA_05309 0.19 +1.8
798,482 + BACOVA_05309 0.27 -2.5
798,496 - BACOVA_05309 0.29 +3.3
798,514 + BACOVA_05309 0.30 -0.8

Or see this region's nucleotide sequence