Experiment: b-Glucan from Oat 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04692 and BACOVA_04693 overlap by 17 nucleotides BACOVA_04693 and BACOVA_04694 are separated by 88 nucleotides BACOVA_04694 and BACOVA_04695 overlap by 26 nucleotides
BACOVA_04692: BACOVA_04692 - hypothetical protein, at 60,185 to 60,775
_04692
BACOVA_04693: BACOVA_04693 - hypothetical protein, at 60,759 to 61,610
_04693
BACOVA_04694: BACOVA_04694 - hypothetical protein, at 61,699 to 61,854
_04694
BACOVA_04695: BACOVA_04695 - putative plasmid recombination enzyme, at 61,829 to 63,286
_04695
Position (kb) 61
62 Strain fitness (log2 ratio) -2
-1
0
1
2 at 60.730 kb on - strand at 60.740 kb on + strand at 60.741 kb on - strand at 60.741 kb on - strand at 60.785 kb on - strand at 60.814 kb on + strand at 60.823 kb on - strand at 60.868 kb on - strand, within BACOVA_04693 at 60.930 kb on + strand, within BACOVA_04693 at 61.091 kb on - strand, within BACOVA_04693 at 61.091 kb on - strand, within BACOVA_04693 at 61.163 kb on - strand, within BACOVA_04693 at 61.163 kb on - strand, within BACOVA_04693 at 61.228 kb on + strand, within BACOVA_04693 at 61.681 kb on + strand at 61.683 kb on + strand at 61.684 kb on - strand at 61.736 kb on + strand, within BACOVA_04694 at 61.936 kb on + strand at 61.942 kb on + strand at 61.952 kb on + strand at 61.952 kb on + strand at 61.952 kb on + strand at 62.005 kb on - strand, within BACOVA_04695 at 62.005 kb on - strand, within BACOVA_04695 at 62.005 kb on - strand, within BACOVA_04695 at 62.053 kb on - strand, within BACOVA_04695 at 62.206 kb on + strand, within BACOVA_04695 at 62.207 kb on - strand, within BACOVA_04695 at 62.213 kb on - strand, within BACOVA_04695 at 62.256 kb on - strand, within BACOVA_04695 at 62.256 kb on - strand, within BACOVA_04695 at 62.277 kb on - strand, within BACOVA_04695 at 62.437 kb on + strand, within BACOVA_04695 at 62.462 kb on - strand, within BACOVA_04695 at 62.493 kb on + strand, within BACOVA_04695 at 62.650 kb on + strand, within BACOVA_04695 at 62.816 kb on - strand, within BACOVA_04695 at 62.829 kb on + strand, within BACOVA_04695 at 62.830 kb on - strand, within BACOVA_04695
Per-strain Table
Position Strand Gene LocusTag Fraction b-Glucan from Oat 2.5 mg/mL (C) remove 60,730 - -2.4 60,740 + +1.2 60,741 - +0.9 60,741 - -0.1 60,785 - -0.5 60,814 + +0.0 60,823 - +0.9 60,868 - BACOVA_04693 0.13 +0.4 60,930 + BACOVA_04693 0.20 -0.3 61,091 - BACOVA_04693 0.39 -1.1 61,091 - BACOVA_04693 0.39 +0.0 61,163 - BACOVA_04693 0.47 -0.1 61,163 - BACOVA_04693 0.47 +1.8 61,228 + BACOVA_04693 0.55 +0.6 61,681 + -0.5 61,683 + -0.3 61,684 - -0.0 61,736 + BACOVA_04694 0.24 -0.7 61,936 + +1.6 61,942 + +1.2 61,952 + +0.5 61,952 + -2.3 61,952 + -2.1 62,005 - BACOVA_04695 0.12 +1.0 62,005 - BACOVA_04695 0.12 +0.3 62,005 - BACOVA_04695 0.12 -0.7 62,053 - BACOVA_04695 0.15 +0.2 62,206 + BACOVA_04695 0.26 +0.5 62,207 - BACOVA_04695 0.26 +0.4 62,213 - BACOVA_04695 0.26 -0.1 62,256 - BACOVA_04695 0.29 -0.6 62,256 - BACOVA_04695 0.29 -0.9 62,277 - BACOVA_04695 0.31 -0.1 62,437 + BACOVA_04695 0.42 -0.9 62,462 - BACOVA_04695 0.43 +0.6 62,493 + BACOVA_04695 0.46 +0.4 62,650 + BACOVA_04695 0.56 -1.1 62,816 - BACOVA_04695 0.68 +0.2 62,829 + BACOVA_04695 0.69 -2.3 62,830 - BACOVA_04695 0.69 -1.1
Or see this region's nucleotide sequence