Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02768

Experiment: b-Glucan from Oat 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02767 and BACOVA_02768 overlap by 71 nucleotidesBACOVA_02768 and BACOVA_02769 are separated by 157 nucleotides BACOVA_02767: BACOVA_02767 - hypothetical protein, at 214,202 to 216,196 _02767 BACOVA_02768: BACOVA_02768 - hypothetical protein, at 216,126 to 216,245 _02768 BACOVA_02769: BACOVA_02769 - glycosyl hydrolase family 3 N-terminal domain protein, at 216,403 to 218,640 _02769 Position (kb) 216 217Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 215.194 kb on + strand, within BACOVA_02767at 215.194 kb on + strand, within BACOVA_02767at 215.195 kb on - strand, within BACOVA_02767at 215.197 kb on - strand, within BACOVA_02767at 215.197 kb on - strand, within BACOVA_02767at 215.205 kb on + strand, within BACOVA_02767at 215.216 kb on - strand, within BACOVA_02767at 215.291 kb on + strand, within BACOVA_02767at 215.300 kb on + strand, within BACOVA_02767at 215.300 kb on + strand, within BACOVA_02767at 215.300 kb on + strand, within BACOVA_02767at 215.300 kb on + strand, within BACOVA_02767at 215.301 kb on - strand, within BACOVA_02767at 215.334 kb on + strand, within BACOVA_02767at 215.335 kb on - strand, within BACOVA_02767at 215.341 kb on + strand, within BACOVA_02767at 215.363 kb on - strand, within BACOVA_02767at 215.419 kb on + strand, within BACOVA_02767at 215.425 kb on + strand, within BACOVA_02767at 215.426 kb on - strand, within BACOVA_02767at 215.427 kb on + strand, within BACOVA_02767at 215.444 kb on + strand, within BACOVA_02767at 215.502 kb on + strand, within BACOVA_02767at 215.503 kb on - strand, within BACOVA_02767at 215.503 kb on - strand, within BACOVA_02767at 215.503 kb on - strand, within BACOVA_02767at 215.504 kb on + strand, within BACOVA_02767at 215.505 kb on - strand, within BACOVA_02767at 215.636 kb on - strand, within BACOVA_02767at 215.664 kb on + strand, within BACOVA_02767at 215.668 kb on + strand, within BACOVA_02767at 215.668 kb on + strand, within BACOVA_02767at 215.669 kb on - strand, within BACOVA_02767at 215.669 kb on - strand, within BACOVA_02767at 215.670 kb on + strand, within BACOVA_02767at 215.671 kb on - strand, within BACOVA_02767at 215.671 kb on - strand, within BACOVA_02767at 215.671 kb on - strand, within BACOVA_02767at 215.671 kb on - strand, within BACOVA_02767at 215.671 kb on - strand, within BACOVA_02767at 215.671 kb on - strand, within BACOVA_02767at 215.673 kb on - strand, within BACOVA_02767at 215.673 kb on - strand, within BACOVA_02767at 215.674 kb on + strand, within BACOVA_02767at 215.675 kb on - strand, within BACOVA_02767at 215.675 kb on - strand, within BACOVA_02767at 215.723 kb on - strand, within BACOVA_02767at 215.730 kb on + strand, within BACOVA_02767at 215.731 kb on - strand, within BACOVA_02767at 215.735 kb on + strand, within BACOVA_02767at 215.736 kb on - strand, within BACOVA_02767at 215.736 kb on - strand, within BACOVA_02767at 215.739 kb on + strand, within BACOVA_02767at 215.740 kb on - strand, within BACOVA_02767at 215.740 kb on - strand, within BACOVA_02767at 215.791 kb on + strand, within BACOVA_02767at 215.830 kb on + strand, within BACOVA_02767at 215.830 kb on + strand, within BACOVA_02767at 215.841 kb on + strand, within BACOVA_02767at 215.841 kb on + strand, within BACOVA_02767at 215.842 kb on - strand, within BACOVA_02767at 215.842 kb on - strand, within BACOVA_02767at 215.920 kb on + strand, within BACOVA_02767at 215.922 kb on + strand, within BACOVA_02767at 215.945 kb on - strand, within BACOVA_02767at 216.017 kb on - strandat 216.033 kb on + strandat 216.034 kb on - strandat 216.052 kb on + strandat 216.052 kb on + strandat 216.056 kb on + strandat 216.057 kb on - strandat 216.066 kb on + strandat 216.122 kb on + strandat 216.122 kb on + strandat 216.201 kb on - strand, within BACOVA_02768at 216.201 kb on - strand, within BACOVA_02768at 216.209 kb on - strand, within BACOVA_02768at 216.328 kb on + strandat 216.338 kb on + strandat 216.338 kb on + strandat 216.339 kb on - strandat 216.339 kb on - strandat 216.340 kb on + strandat 216.341 kb on - strandat 216.355 kb on + strandat 216.355 kb on + strandat 216.356 kb on - strandat 216.356 kb on - strandat 216.412 kb on + strandat 216.414 kb on + strandat 216.415 kb on - strandat 216.415 kb on - strandat 216.415 kb on - strandat 216.421 kb on + strandat 216.429 kb on - strandat 216.429 kb on - strandat 216.429 kb on - strandat 216.431 kb on + strandat 216.432 kb on - strandat 216.435 kb on + strandat 216.439 kb on - strandat 216.442 kb on + strandat 216.442 kb on + strandat 216.450 kb on - strandat 216.478 kb on - strandat 216.504 kb on - strandat 216.560 kb on - strandat 216.588 kb on + strandat 216.588 kb on + strandat 216.589 kb on - strandat 216.589 kb on - strandat 216.657 kb on + strand, within BACOVA_02769at 216.657 kb on + strand, within BACOVA_02769at 216.680 kb on - strand, within BACOVA_02769at 216.722 kb on + strand, within BACOVA_02769at 216.723 kb on - strand, within BACOVA_02769at 216.723 kb on - strand, within BACOVA_02769at 216.756 kb on + strand, within BACOVA_02769at 216.756 kb on + strand, within BACOVA_02769at 216.756 kb on + strand, within BACOVA_02769at 216.756 kb on + strand, within BACOVA_02769at 216.757 kb on - strand, within BACOVA_02769at 216.848 kb on - strand, within BACOVA_02769at 216.852 kb on + strand, within BACOVA_02769at 216.879 kb on - strand, within BACOVA_02769at 216.879 kb on - strand, within BACOVA_02769at 216.879 kb on - strand, within BACOVA_02769at 216.879 kb on - strand, within BACOVA_02769at 216.882 kb on + strand, within BACOVA_02769at 216.882 kb on + strand, within BACOVA_02769at 216.912 kb on + strand, within BACOVA_02769at 216.912 kb on + strand, within BACOVA_02769at 216.912 kb on + strand, within BACOVA_02769at 216.913 kb on - strand, within BACOVA_02769at 216.933 kb on + strand, within BACOVA_02769at 216.933 kb on + strand, within BACOVA_02769at 216.934 kb on - strand, within BACOVA_02769at 216.934 kb on - strand, within BACOVA_02769at 216.934 kb on - strand, within BACOVA_02769at 216.969 kb on - strand, within BACOVA_02769at 216.969 kb on - strand, within BACOVA_02769at 216.969 kb on - strand, within BACOVA_02769at 216.991 kb on + strand, within BACOVA_02769at 217.006 kb on - strand, within BACOVA_02769at 217.081 kb on - strand, within BACOVA_02769at 217.107 kb on - strand, within BACOVA_02769at 217.108 kb on + strand, within BACOVA_02769at 217.125 kb on + strand, within BACOVA_02769at 217.126 kb on - strand, within BACOVA_02769at 217.126 kb on - strand, within BACOVA_02769at 217.134 kb on - strand, within BACOVA_02769at 217.145 kb on + strand, within BACOVA_02769at 217.149 kb on + strand, within BACOVA_02769at 217.150 kb on - strand, within BACOVA_02769at 217.150 kb on - strand, within BACOVA_02769at 217.176 kb on - strand, within BACOVA_02769at 217.220 kb on + strand, within BACOVA_02769at 217.221 kb on - strand, within BACOVA_02769

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Per-strain Table

Position Strand Gene LocusTag Fraction b-Glucan from Oat 2.5 mg/mL (C)
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215,194 + BACOVA_02767 0.50 -0.3
215,194 + BACOVA_02767 0.50 +1.0
215,195 - BACOVA_02767 0.50 -1.2
215,197 - BACOVA_02767 0.50 +0.1
215,197 - BACOVA_02767 0.50 -1.2
215,205 + BACOVA_02767 0.50 +0.8
215,216 - BACOVA_02767 0.51 -0.1
215,291 + BACOVA_02767 0.55 +0.0
215,300 + BACOVA_02767 0.55 -1.8
215,300 + BACOVA_02767 0.55 +0.9
215,300 + BACOVA_02767 0.55 +0.4
215,300 + BACOVA_02767 0.55 +2.1
215,301 - BACOVA_02767 0.55 +1.9
215,334 + BACOVA_02767 0.57 +0.4
215,335 - BACOVA_02767 0.57 +0.0
215,341 + BACOVA_02767 0.57 -1.4
215,363 - BACOVA_02767 0.58 +0.6
215,419 + BACOVA_02767 0.61 +0.1
215,425 + BACOVA_02767 0.61 +0.5
215,426 - BACOVA_02767 0.61 -0.7
215,427 + BACOVA_02767 0.61 +0.8
215,444 + BACOVA_02767 0.62 +0.8
215,502 + BACOVA_02767 0.65 -1.7
215,503 - BACOVA_02767 0.65 +0.2
215,503 - BACOVA_02767 0.65 -1.4
215,503 - BACOVA_02767 0.65 -0.6
215,504 + BACOVA_02767 0.65 -0.2
215,505 - BACOVA_02767 0.65 -0.4
215,636 - BACOVA_02767 0.72 +1.4
215,664 + BACOVA_02767 0.73 +0.6
215,668 + BACOVA_02767 0.73 +0.2
215,668 + BACOVA_02767 0.73 +2.4
215,669 - BACOVA_02767 0.74 -1.2
215,669 - BACOVA_02767 0.74 -1.4
215,670 + BACOVA_02767 0.74 +1.2
215,671 - BACOVA_02767 0.74 +0.6
215,671 - BACOVA_02767 0.74 +1.6
215,671 - BACOVA_02767 0.74 +2.1
215,671 - BACOVA_02767 0.74 -2.0
215,671 - BACOVA_02767 0.74 -0.0
215,671 - BACOVA_02767 0.74 +0.0
215,673 - BACOVA_02767 0.74 -1.2
215,673 - BACOVA_02767 0.74 +1.6
215,674 + BACOVA_02767 0.74 -0.2
215,675 - BACOVA_02767 0.74 -0.4
215,675 - BACOVA_02767 0.74 -1.4
215,723 - BACOVA_02767 0.76 +0.1
215,730 + BACOVA_02767 0.77 -1.4
215,731 - BACOVA_02767 0.77 -0.1
215,735 + BACOVA_02767 0.77 +1.0
215,736 - BACOVA_02767 0.77 +0.2
215,736 - BACOVA_02767 0.77 -1.0
215,739 + BACOVA_02767 0.77 +0.2
215,740 - BACOVA_02767 0.77 +0.5
215,740 - BACOVA_02767 0.77 -1.3
215,791 + BACOVA_02767 0.80 +0.9
215,830 + BACOVA_02767 0.82 -1.8
215,830 + BACOVA_02767 0.82 -1.6
215,841 + BACOVA_02767 0.82 -1.2
215,841 + BACOVA_02767 0.82 -0.3
215,842 - BACOVA_02767 0.82 -1.5
215,842 - BACOVA_02767 0.82 +0.4
215,920 + BACOVA_02767 0.86 -1.6
215,922 + BACOVA_02767 0.86 +0.6
215,945 - BACOVA_02767 0.87 +1.4
216,017 - -0.3
216,033 + -0.8
216,034 - -1.8
216,052 + +0.7
216,052 + -1.1
216,056 + +0.7
216,057 - +0.1
216,066 + +0.1
216,122 + -0.9
216,122 + -0.3
216,201 - BACOVA_02768 0.62 -1.2
216,201 - BACOVA_02768 0.62 -0.3
216,209 - BACOVA_02768 0.69 -1.3
216,328 + -0.3
216,338 + +0.2
216,338 + -1.3
216,339 - -0.5
216,339 - -2.7
216,340 + -0.2
216,341 - -1.5
216,355 + +1.7
216,355 + -1.1
216,356 - -2.5
216,356 - +0.3
216,412 + -1.1
216,414 + +1.2
216,415 - -0.1
216,415 - -1.3
216,415 - -1.9
216,421 + -0.4
216,429 - -0.6
216,429 - +1.1
216,429 - +0.3
216,431 + +0.6
216,432 - +1.6
216,435 + -1.4
216,439 - -0.6
216,442 + -1.9
216,442 + -1.2
216,450 - -1.0
216,478 - -0.7
216,504 - -0.9
216,560 - -0.2
216,588 + +1.9
216,588 + -1.0
216,589 - +0.8
216,589 - +0.5
216,657 + BACOVA_02769 0.11 -0.4
216,657 + BACOVA_02769 0.11 -0.0
216,680 - BACOVA_02769 0.12 +0.9
216,722 + BACOVA_02769 0.14 +0.5
216,723 - BACOVA_02769 0.14 +0.2
216,723 - BACOVA_02769 0.14 -0.3
216,756 + BACOVA_02769 0.16 -0.5
216,756 + BACOVA_02769 0.16 +1.5
216,756 + BACOVA_02769 0.16 -3.0
216,756 + BACOVA_02769 0.16 -0.1
216,757 - BACOVA_02769 0.16 +2.0
216,848 - BACOVA_02769 0.20 +2.5
216,852 + BACOVA_02769 0.20 +0.3
216,879 - BACOVA_02769 0.21 +2.1
216,879 - BACOVA_02769 0.21 +0.3
216,879 - BACOVA_02769 0.21 +0.4
216,879 - BACOVA_02769 0.21 +0.5
216,882 + BACOVA_02769 0.21 +1.1
216,882 + BACOVA_02769 0.21 -0.9
216,912 + BACOVA_02769 0.23 -1.1
216,912 + BACOVA_02769 0.23 -0.1
216,912 + BACOVA_02769 0.23 -1.9
216,913 - BACOVA_02769 0.23 +0.3
216,933 + BACOVA_02769 0.24 +0.0
216,933 + BACOVA_02769 0.24 +2.3
216,934 - BACOVA_02769 0.24 -0.6
216,934 - BACOVA_02769 0.24 -1.3
216,934 - BACOVA_02769 0.24 -0.8
216,969 - BACOVA_02769 0.25 +0.8
216,969 - BACOVA_02769 0.25 -1.8
216,969 - BACOVA_02769 0.25 -3.0
216,991 + BACOVA_02769 0.26 -1.3
217,006 - BACOVA_02769 0.27 -1.7
217,081 - BACOVA_02769 0.30 -0.1
217,107 - BACOVA_02769 0.31 +0.5
217,108 + BACOVA_02769 0.32 -1.4
217,125 + BACOVA_02769 0.32 -0.3
217,126 - BACOVA_02769 0.32 +0.9
217,126 - BACOVA_02769 0.32 +0.1
217,134 - BACOVA_02769 0.33 -1.7
217,145 + BACOVA_02769 0.33 -1.3
217,149 + BACOVA_02769 0.33 -0.0
217,150 - BACOVA_02769 0.33 +0.5
217,150 - BACOVA_02769 0.33 -1.0
217,176 - BACOVA_02769 0.35 -0.4
217,220 + BACOVA_02769 0.37 +0.4
217,221 - BACOVA_02769 0.37 +0.0

Or see this region's nucleotide sequence