Experiment: b-Glucan from Oat 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_01860 and BACOVA_01861 are separated by 57 nucleotides BACOVA_01861 and BACOVA_01862 are separated by 85 nucleotides
BACOVA_01860: BACOVA_01860 - cell division protein FtsA, at 56,529 to 57,980
_01860
BACOVA_01861: BACOVA_01861 - cell division protein FtsZ, at 58,038 to 59,348
_01861
BACOVA_01862: BACOVA_01862 - YqeY-like protein, at 59,434 to 59,883
_01862
Position (kb)
58
59
60 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 59.264 kb on + strand at 59.302 kb on + strand at 59.339 kb on + strand at 59.339 kb on + strand at 59.373 kb on + strand at 59.425 kb on + strand at 59.426 kb on - strand at 59.426 kb on - strand at 59.430 kb on + strand at 59.442 kb on - strand at 59.466 kb on + strand at 59.467 kb on - strand at 59.518 kb on - strand, within BACOVA_01862 at 59.520 kb on - strand, within BACOVA_01862 at 59.541 kb on + strand, within BACOVA_01862 at 59.541 kb on + strand, within BACOVA_01862 at 59.541 kb on + strand, within BACOVA_01862 at 59.542 kb on - strand, within BACOVA_01862 at 59.560 kb on - strand, within BACOVA_01862 at 59.565 kb on + strand, within BACOVA_01862 at 59.639 kb on - strand, within BACOVA_01862 at 59.639 kb on - strand, within BACOVA_01862 at 59.678 kb on + strand, within BACOVA_01862 at 59.791 kb on - strand, within BACOVA_01862 at 59.797 kb on - strand, within BACOVA_01862 at 59.801 kb on + strand, within BACOVA_01862 at 59.801 kb on + strand, within BACOVA_01862 at 59.802 kb on - strand, within BACOVA_01862 at 59.825 kb on + strand, within BACOVA_01862 at 59.826 kb on - strand, within BACOVA_01862 at 59.941 kb on - strand at 59.952 kb on - strand at 59.964 kb on - strand at 59.964 kb on - strand at 59.974 kb on + strand at 60.017 kb on + strand at 60.017 kb on + strand at 60.022 kb on + strand at 60.023 kb on - strand at 60.145 kb on + strand at 60.145 kb on + strand at 60.145 kb on + strand at 60.146 kb on - strand at 60.171 kb on - strand at 60.187 kb on - strand at 60.189 kb on + strand at 60.189 kb on + strand at 60.190 kb on - strand at 60.201 kb on + strand at 60.201 kb on + strand at 60.212 kb on - strand at 60.236 kb on + strand at 60.246 kb on + strand at 60.255 kb on + strand at 60.255 kb on + strand at 60.256 kb on - strand at 60.268 kb on + strand at 60.269 kb on - strand at 60.335 kb on + strand at 60.335 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction b-Glucan from Oat 2.5 mg/mL (C) remove 59,264 + -0.6 59,302 + -0.5 59,339 + -2.7 59,339 + -1.6 59,373 + +1.1 59,425 + +0.6 59,426 - +0.4 59,426 - +0.6 59,430 + -0.9 59,442 - +1.3 59,466 + -0.3 59,467 - +1.2 59,518 - BACOVA_01862 0.19 +0.4 59,520 - BACOVA_01862 0.19 +1.2 59,541 + BACOVA_01862 0.24 -2.0 59,541 + BACOVA_01862 0.24 -0.5 59,541 + BACOVA_01862 0.24 -0.5 59,542 - BACOVA_01862 0.24 -0.4 59,560 - BACOVA_01862 0.28 -1.5 59,565 + BACOVA_01862 0.29 -2.9 59,639 - BACOVA_01862 0.46 -0.7 59,639 - BACOVA_01862 0.46 -0.7 59,678 + BACOVA_01862 0.54 -2.0 59,791 - BACOVA_01862 0.79 +0.5 59,797 - BACOVA_01862 0.81 -0.9 59,801 + BACOVA_01862 0.82 -0.4 59,801 + BACOVA_01862 0.82 -1.3 59,802 - BACOVA_01862 0.82 -1.0 59,825 + BACOVA_01862 0.87 -1.4 59,826 - BACOVA_01862 0.87 -0.4 59,941 - -1.3 59,952 - +0.5 59,964 - +0.8 59,964 - -0.2 59,974 + -0.2 60,017 + -0.7 60,017 + -0.7 60,022 + -1.5 60,023 - +0.7 60,145 + -0.8 60,145 + -0.0 60,145 + -0.7 60,146 - +0.4 60,171 - -0.3 60,187 - -1.7 60,189 + +0.2 60,189 + -0.9 60,190 - -0.2 60,201 + -0.0 60,201 + +0.6 60,212 - -0.2 60,236 + -0.7 60,246 + +1.1 60,255 + +1.2 60,255 + -0.5 60,256 - -1.3 60,268 + -0.2 60,269 - -1.4 60,335 + -0.4 60,335 + +0.5
Or see this region's nucleotide sequence