Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01861

Experiment: b-Glucan from Oat 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01860 and BACOVA_01861 are separated by 57 nucleotidesBACOVA_01861 and BACOVA_01862 are separated by 85 nucleotides BACOVA_01860: BACOVA_01860 - cell division protein FtsA, at 56,529 to 57,980 _01860 BACOVA_01861: BACOVA_01861 - cell division protein FtsZ, at 58,038 to 59,348 _01861 BACOVA_01862: BACOVA_01862 - YqeY-like protein, at 59,434 to 59,883 _01862 Position (kb) 58 59 60Strain fitness (log2 ratio) -3 -2 -1 0 1at 59.264 kb on + strandat 59.302 kb on + strandat 59.339 kb on + strandat 59.339 kb on + strandat 59.373 kb on + strandat 59.425 kb on + strandat 59.426 kb on - strandat 59.426 kb on - strandat 59.430 kb on + strandat 59.442 kb on - strandat 59.466 kb on + strandat 59.467 kb on - strandat 59.518 kb on - strand, within BACOVA_01862at 59.520 kb on - strand, within BACOVA_01862at 59.541 kb on + strand, within BACOVA_01862at 59.541 kb on + strand, within BACOVA_01862at 59.541 kb on + strand, within BACOVA_01862at 59.542 kb on - strand, within BACOVA_01862at 59.560 kb on - strand, within BACOVA_01862at 59.565 kb on + strand, within BACOVA_01862at 59.639 kb on - strand, within BACOVA_01862at 59.639 kb on - strand, within BACOVA_01862at 59.678 kb on + strand, within BACOVA_01862at 59.791 kb on - strand, within BACOVA_01862at 59.797 kb on - strand, within BACOVA_01862at 59.801 kb on + strand, within BACOVA_01862at 59.801 kb on + strand, within BACOVA_01862at 59.802 kb on - strand, within BACOVA_01862at 59.825 kb on + strand, within BACOVA_01862at 59.826 kb on - strand, within BACOVA_01862at 59.941 kb on - strandat 59.952 kb on - strandat 59.964 kb on - strandat 59.964 kb on - strandat 59.974 kb on + strandat 60.017 kb on + strandat 60.017 kb on + strandat 60.022 kb on + strandat 60.023 kb on - strandat 60.145 kb on + strandat 60.145 kb on + strandat 60.145 kb on + strandat 60.146 kb on - strandat 60.171 kb on - strandat 60.187 kb on - strandat 60.189 kb on + strandat 60.189 kb on + strandat 60.190 kb on - strandat 60.201 kb on + strandat 60.201 kb on + strandat 60.212 kb on - strandat 60.236 kb on + strandat 60.246 kb on + strandat 60.255 kb on + strandat 60.255 kb on + strandat 60.256 kb on - strandat 60.268 kb on + strandat 60.269 kb on - strandat 60.335 kb on + strandat 60.335 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction b-Glucan from Oat 2.5 mg/mL (C)
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59,264 + -0.6
59,302 + -0.5
59,339 + -2.7
59,339 + -1.6
59,373 + +1.1
59,425 + +0.6
59,426 - +0.4
59,426 - +0.6
59,430 + -0.9
59,442 - +1.3
59,466 + -0.3
59,467 - +1.2
59,518 - BACOVA_01862 0.19 +0.4
59,520 - BACOVA_01862 0.19 +1.2
59,541 + BACOVA_01862 0.24 -2.0
59,541 + BACOVA_01862 0.24 -0.5
59,541 + BACOVA_01862 0.24 -0.5
59,542 - BACOVA_01862 0.24 -0.4
59,560 - BACOVA_01862 0.28 -1.5
59,565 + BACOVA_01862 0.29 -2.9
59,639 - BACOVA_01862 0.46 -0.7
59,639 - BACOVA_01862 0.46 -0.7
59,678 + BACOVA_01862 0.54 -2.0
59,791 - BACOVA_01862 0.79 +0.5
59,797 - BACOVA_01862 0.81 -0.9
59,801 + BACOVA_01862 0.82 -0.4
59,801 + BACOVA_01862 0.82 -1.3
59,802 - BACOVA_01862 0.82 -1.0
59,825 + BACOVA_01862 0.87 -1.4
59,826 - BACOVA_01862 0.87 -0.4
59,941 - -1.3
59,952 - +0.5
59,964 - +0.8
59,964 - -0.2
59,974 + -0.2
60,017 + -0.7
60,017 + -0.7
60,022 + -1.5
60,023 - +0.7
60,145 + -0.8
60,145 + -0.0
60,145 + -0.7
60,146 - +0.4
60,171 - -0.3
60,187 - -1.7
60,189 + +0.2
60,189 + -0.9
60,190 - -0.2
60,201 + -0.0
60,201 + +0.6
60,212 - -0.2
60,236 + -0.7
60,246 + +1.1
60,255 + +1.2
60,255 + -0.5
60,256 - -1.3
60,268 + -0.2
60,269 - -1.4
60,335 + -0.4
60,335 + +0.5

Or see this region's nucleotide sequence