Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03088 and MPMX26_03089 are separated by 90 nucleotides MPMX26_03089 and MPMX26_03090 are separated by 364 nucleotides MPMX26_03090 and MPMX26_03091 are separated by 27 nucleotides
MPMX26_03088: MPMX26_03088 - hypothetical protein, at 2,666 to 3,340
_03088
MPMX26_03089: MPMX26_03089 - hypothetical protein, at 3,431 to 3,748
_03089
MPMX26_03090: MPMX26_03090 - hypothetical protein, at 4,113 to 4,655
_03090
MPMX26_03091: MPMX26_03091 - hypothetical protein, at 4,683 to 5,879
_03091
Position (kb) 4
5 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 3.159 kb on + strand, within MPMX26_03088 at 3.187 kb on + strand, within MPMX26_03088 at 3.200 kb on + strand, within MPMX26_03088 at 3.223 kb on + strand, within MPMX26_03088 at 3.265 kb on - strand, within MPMX26_03088 at 3.385 kb on + strand at 3.424 kb on - strand at 3.424 kb on - strand at 3.523 kb on - strand, within MPMX26_03089 at 3.823 kb on + strand at 3.951 kb on + strand at 3.966 kb on + strand at 4.134 kb on + strand at 4.191 kb on + strand, within MPMX26_03090 at 4.194 kb on + strand, within MPMX26_03090 at 4.199 kb on + strand, within MPMX26_03090 at 4.199 kb on + strand, within MPMX26_03090 at 4.199 kb on + strand, within MPMX26_03090 at 4.201 kb on + strand, within MPMX26_03090 at 4.201 kb on + strand, within MPMX26_03090 at 4.268 kb on + strand, within MPMX26_03090 at 4.268 kb on + strand, within MPMX26_03090 at 4.268 kb on + strand, within MPMX26_03090 at 4.268 kb on + strand, within MPMX26_03090 at 4.268 kb on + strand, within MPMX26_03090 at 4.274 kb on + strand, within MPMX26_03090 at 4.289 kb on + strand, within MPMX26_03090 at 4.329 kb on + strand, within MPMX26_03090 at 4.363 kb on + strand, within MPMX26_03090 at 4.368 kb on + strand, within MPMX26_03090 at 4.557 kb on + strand, within MPMX26_03090 at 4.572 kb on + strand, within MPMX26_03090 at 4.606 kb on + strand at 4.613 kb on + strand at 4.622 kb on + strand at 4.636 kb on + strand at 4.636 kb on + strand at 4.636 kb on + strand at 4.636 kb on + strand at 4.645 kb on + strand at 4.650 kb on + strand at 4.650 kb on + strand at 4.655 kb on + strand at 4.655 kb on + strand at 4.655 kb on + strand at 4.660 kb on + strand at 4.664 kb on + strand at 4.664 kb on + strand at 4.671 kb on + strand at 4.671 kb on + strand at 4.674 kb on + strand at 4.895 kb on + strand, within MPMX26_03091 at 5.040 kb on + strand, within MPMX26_03091 at 5.055 kb on + strand, within MPMX26_03091 at 5.602 kb on - strand, within MPMX26_03091
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 3,159 + MPMX26_03088 0.73 +0.6 3,187 + MPMX26_03088 0.77 -0.8 3,200 + MPMX26_03088 0.79 -0.2 3,223 + MPMX26_03088 0.83 +0.0 3,265 - MPMX26_03088 0.89 -0.4 3,385 + -2.8 3,424 - -1.0 3,424 - -0.2 3,523 - MPMX26_03089 0.29 +1.2 3,823 + +0.4 3,951 + +0.3 3,966 + +0.6 4,134 + -0.3 4,191 + MPMX26_03090 0.14 +0.2 4,194 + MPMX26_03090 0.15 +0.7 4,199 + MPMX26_03090 0.16 -0.3 4,199 + MPMX26_03090 0.16 +0.6 4,199 + MPMX26_03090 0.16 +0.5 4,201 + MPMX26_03090 0.16 +0.2 4,201 + MPMX26_03090 0.16 +0.8 4,268 + MPMX26_03090 0.29 -0.2 4,268 + MPMX26_03090 0.29 -0.4 4,268 + MPMX26_03090 0.29 +0.7 4,268 + MPMX26_03090 0.29 +1.1 4,268 + MPMX26_03090 0.29 -0.7 4,274 + MPMX26_03090 0.30 +0.8 4,289 + MPMX26_03090 0.32 +0.2 4,329 + MPMX26_03090 0.40 -0.1 4,363 + MPMX26_03090 0.46 +0.4 4,368 + MPMX26_03090 0.47 -0.1 4,557 + MPMX26_03090 0.82 +0.5 4,572 + MPMX26_03090 0.85 -0.4 4,606 + +0.6 4,613 + -0.0 4,622 + +0.1 4,636 + +0.2 4,636 + -0.6 4,636 + +0.5 4,636 + +0.4 4,645 + +0.9 4,650 + +0.1 4,650 + +0.4 4,655 + +0.3 4,655 + -0.2 4,655 + +0.3 4,660 + +0.0 4,664 + +0.2 4,664 + -0.4 4,671 + +0.2 4,671 + -0.1 4,674 + +0.4 4,895 + MPMX26_03091 0.18 -0.4 5,040 + MPMX26_03091 0.30 +0.6 5,055 + MPMX26_03091 0.31 +0.4 5,602 - MPMX26_03091 0.77 +1.1
Or see this region's nucleotide sequence