Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02481

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02480 and MPMX26_02481 are separated by 70 nucleotidesMPMX26_02481 and MPMX26_02482 are separated by 260 nucleotides MPMX26_02480: MPMX26_02480 - hypothetical protein, at 2,565,054 to 2,565,596 _02480 MPMX26_02481: MPMX26_02481 - 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming), at 2,565,667 to 2,568,273 _02481 MPMX26_02482: MPMX26_02482 - tRNA-modifying protein YgfZ, at 2,568,534 to 2,569,253 _02482 Position (kb) 2565 2566 2567 2568 2569Strain fitness (log2 ratio) -2 -1 0 1at 2565.214 kb on - strand, within MPMX26_02480at 2565.721 kb on - strandat 2565.831 kb on - strandat 2565.870 kb on - strandat 2565.870 kb on - strandat 2565.870 kb on - strandat 2565.870 kb on - strandat 2565.870 kb on - strandat 2565.898 kb on - strandat 2565.940 kb on - strand, within MPMX26_02481at 2566.011 kb on - strand, within MPMX26_02481at 2566.017 kb on - strand, within MPMX26_02481at 2566.264 kb on - strand, within MPMX26_02481at 2566.270 kb on - strand, within MPMX26_02481at 2566.308 kb on - strand, within MPMX26_02481at 2566.363 kb on - strand, within MPMX26_02481at 2566.363 kb on - strand, within MPMX26_02481at 2566.637 kb on - strand, within MPMX26_02481at 2566.695 kb on - strand, within MPMX26_02481at 2566.786 kb on - strand, within MPMX26_02481at 2566.849 kb on - strand, within MPMX26_02481at 2567.209 kb on - strand, within MPMX26_02481at 2567.209 kb on - strand, within MPMX26_02481at 2567.209 kb on - strand, within MPMX26_02481at 2567.209 kb on - strand, within MPMX26_02481at 2567.209 kb on - strand, within MPMX26_02481at 2567.214 kb on - strand, within MPMX26_02481at 2567.226 kb on - strand, within MPMX26_02481at 2567.251 kb on - strand, within MPMX26_02481at 2567.362 kb on - strand, within MPMX26_02481at 2567.362 kb on - strand, within MPMX26_02481at 2567.362 kb on - strand, within MPMX26_02481at 2567.503 kb on - strand, within MPMX26_02481at 2567.528 kb on - strand, within MPMX26_02481at 2567.665 kb on - strand, within MPMX26_02481at 2567.719 kb on - strand, within MPMX26_02481at 2567.724 kb on - strand, within MPMX26_02481at 2567.752 kb on - strand, within MPMX26_02481at 2567.752 kb on - strand, within MPMX26_02481at 2567.856 kb on - strand, within MPMX26_02481at 2567.856 kb on - strand, within MPMX26_02481at 2567.856 kb on - strand, within MPMX26_02481at 2567.971 kb on - strand, within MPMX26_02481at 2567.971 kb on - strand, within MPMX26_02481at 2568.015 kb on - strandat 2568.015 kb on - strandat 2568.015 kb on - strandat 2568.082 kb on - strandat 2568.082 kb on - strandat 2568.082 kb on - strandat 2568.172 kb on - strandat 2568.217 kb on - strandat 2568.217 kb on - strandat 2568.227 kb on - strandat 2568.350 kb on - strandat 2568.518 kb on + strandat 2569.223 kb on + strandat 2569.248 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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2,565,214 - MPMX26_02480 0.29 -0.5
2,565,721 - +0.2
2,565,831 - -2.5
2,565,870 - -1.8
2,565,870 - -0.6
2,565,870 - -1.7
2,565,870 - -0.4
2,565,870 - -1.1
2,565,898 - -1.4
2,565,940 - MPMX26_02481 0.10 -0.6
2,566,011 - MPMX26_02481 0.13 -0.6
2,566,017 - MPMX26_02481 0.13 -1.7
2,566,264 - MPMX26_02481 0.23 -0.8
2,566,270 - MPMX26_02481 0.23 -1.5
2,566,308 - MPMX26_02481 0.25 -0.8
2,566,363 - MPMX26_02481 0.27 -1.7
2,566,363 - MPMX26_02481 0.27 -0.3
2,566,637 - MPMX26_02481 0.37 -0.3
2,566,695 - MPMX26_02481 0.39 -1.7
2,566,786 - MPMX26_02481 0.43 +1.0
2,566,849 - MPMX26_02481 0.45 +0.0
2,567,209 - MPMX26_02481 0.59 -1.8
2,567,209 - MPMX26_02481 0.59 -1.0
2,567,209 - MPMX26_02481 0.59 -2.5
2,567,209 - MPMX26_02481 0.59 -1.3
2,567,209 - MPMX26_02481 0.59 -0.6
2,567,214 - MPMX26_02481 0.59 -0.6
2,567,226 - MPMX26_02481 0.60 -1.6
2,567,251 - MPMX26_02481 0.61 -2.4
2,567,362 - MPMX26_02481 0.65 -0.6
2,567,362 - MPMX26_02481 0.65 -2.3
2,567,362 - MPMX26_02481 0.65 -1.1
2,567,503 - MPMX26_02481 0.70 -0.8
2,567,528 - MPMX26_02481 0.71 -1.7
2,567,665 - MPMX26_02481 0.77 -1.9
2,567,719 - MPMX26_02481 0.79 -0.6
2,567,724 - MPMX26_02481 0.79 -2.5
2,567,752 - MPMX26_02481 0.80 -1.4
2,567,752 - MPMX26_02481 0.80 +0.0
2,567,856 - MPMX26_02481 0.84 -1.8
2,567,856 - MPMX26_02481 0.84 -1.1
2,567,856 - MPMX26_02481 0.84 -1.0
2,567,971 - MPMX26_02481 0.88 +0.2
2,567,971 - MPMX26_02481 0.88 -2.1
2,568,015 - -1.9
2,568,015 - -1.9
2,568,015 - -1.0
2,568,082 - -1.6
2,568,082 - -2.4
2,568,082 - +0.7
2,568,172 - -2.2
2,568,217 - -1.8
2,568,217 - -1.2
2,568,227 - -2.3
2,568,350 - +0.3
2,568,518 + +0.1
2,569,223 + -0.1
2,569,248 + -0.3

Or see this region's nucleotide sequence