Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02253

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02252 and MPMX26_02253 are separated by 232 nucleotidesMPMX26_02253 and MPMX26_02254 are separated by 272 nucleotidesMPMX26_02254 and MPMX26_02255 are separated by 87 nucleotides MPMX26_02252: MPMX26_02252 - Glutamate dehydrogenase, at 2,318,319 to 2,319,590 _02252 MPMX26_02253: MPMX26_02253 - Regulatory protein AsnC, at 2,319,823 to 2,320,245 _02253 MPMX26_02254: MPMX26_02254 - tRNA-Ser, at 2,320,518 to 2,320,607 _02254 MPMX26_02255: MPMX26_02255 - 2,4-dienoyl-CoA reductase, at 2,320,695 to 2,322,725 _02255 Position (kb) 2319 2320 2321Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2318.850 kb on - strand, within MPMX26_02252at 2318.855 kb on - strand, within MPMX26_02252at 2318.855 kb on - strand, within MPMX26_02252at 2318.855 kb on - strand, within MPMX26_02252at 2318.855 kb on - strand, within MPMX26_02252at 2318.927 kb on - strand, within MPMX26_02252at 2318.927 kb on - strand, within MPMX26_02252at 2318.927 kb on - strand, within MPMX26_02252at 2318.927 kb on - strand, within MPMX26_02252at 2318.927 kb on - strand, within MPMX26_02252at 2318.927 kb on - strand, within MPMX26_02252at 2318.927 kb on - strand, within MPMX26_02252at 2318.927 kb on - strand, within MPMX26_02252at 2318.940 kb on - strand, within MPMX26_02252at 2318.952 kb on - strand, within MPMX26_02252at 2318.979 kb on - strand, within MPMX26_02252at 2319.015 kb on - strand, within MPMX26_02252at 2319.019 kb on - strand, within MPMX26_02252at 2319.024 kb on - strand, within MPMX26_02252at 2319.051 kb on - strand, within MPMX26_02252at 2319.070 kb on - strand, within MPMX26_02252at 2319.070 kb on - strand, within MPMX26_02252at 2319.070 kb on - strand, within MPMX26_02252at 2319.105 kb on - strand, within MPMX26_02252at 2319.180 kb on - strand, within MPMX26_02252at 2319.185 kb on - strand, within MPMX26_02252at 2319.260 kb on - strand, within MPMX26_02252at 2319.270 kb on - strand, within MPMX26_02252at 2319.318 kb on - strand, within MPMX26_02252at 2319.318 kb on - strand, within MPMX26_02252at 2319.323 kb on - strand, within MPMX26_02252at 2319.323 kb on - strand, within MPMX26_02252at 2319.368 kb on - strand, within MPMX26_02252at 2319.369 kb on - strand, within MPMX26_02252at 2319.369 kb on - strand, within MPMX26_02252at 2319.390 kb on - strand, within MPMX26_02252at 2319.395 kb on - strand, within MPMX26_02252at 2319.405 kb on - strand, within MPMX26_02252at 2319.424 kb on - strand, within MPMX26_02252at 2319.466 kb on - strandat 2319.526 kb on - strandat 2319.567 kb on - strandat 2319.567 kb on - strandat 2319.567 kb on - strandat 2319.567 kb on - strandat 2319.572 kb on - strandat 2319.922 kb on + strand, within MPMX26_02253at 2319.955 kb on + strand, within MPMX26_02253at 2319.961 kb on + strand, within MPMX26_02253at 2319.968 kb on + strand, within MPMX26_02253at 2319.971 kb on + strand, within MPMX26_02253at 2320.048 kb on + strand, within MPMX26_02253at 2320.084 kb on + strand, within MPMX26_02253at 2320.198 kb on + strand, within MPMX26_02253at 2320.198 kb on + strand, within MPMX26_02253at 2320.219 kb on + strandat 2320.541 kb on - strand, within MPMX26_02254at 2320.542 kb on - strand, within MPMX26_02254at 2320.603 kb on - strandat 2320.603 kb on - strandat 2320.720 kb on - strandat 2320.761 kb on - strandat 2320.796 kb on - strandat 2320.872 kb on - strandat 2320.886 kb on - strandat 2320.953 kb on - strand, within MPMX26_02255at 2321.148 kb on - strand, within MPMX26_02255

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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2,318,850 - MPMX26_02252 0.42 -3.6
2,318,855 - MPMX26_02252 0.42 -2.6
2,318,855 - MPMX26_02252 0.42 -2.6
2,318,855 - MPMX26_02252 0.42 -2.2
2,318,855 - MPMX26_02252 0.42 -2.2
2,318,927 - MPMX26_02252 0.48 -1.6
2,318,927 - MPMX26_02252 0.48 -1.5
2,318,927 - MPMX26_02252 0.48 -1.9
2,318,927 - MPMX26_02252 0.48 -1.3
2,318,927 - MPMX26_02252 0.48 -2.9
2,318,927 - MPMX26_02252 0.48 -1.3
2,318,927 - MPMX26_02252 0.48 -1.5
2,318,927 - MPMX26_02252 0.48 -2.6
2,318,940 - MPMX26_02252 0.49 -2.1
2,318,952 - MPMX26_02252 0.50 -3.1
2,318,979 - MPMX26_02252 0.52 -1.6
2,319,015 - MPMX26_02252 0.55 -1.3
2,319,019 - MPMX26_02252 0.55 -1.6
2,319,024 - MPMX26_02252 0.55 -2.2
2,319,051 - MPMX26_02252 0.58 -2.2
2,319,070 - MPMX26_02252 0.59 -1.8
2,319,070 - MPMX26_02252 0.59 +0.1
2,319,070 - MPMX26_02252 0.59 -0.1
2,319,105 - MPMX26_02252 0.62 -0.4
2,319,180 - MPMX26_02252 0.68 -4.2
2,319,185 - MPMX26_02252 0.68 -2.1
2,319,260 - MPMX26_02252 0.74 -1.3
2,319,270 - MPMX26_02252 0.75 -1.6
2,319,318 - MPMX26_02252 0.79 -1.6
2,319,318 - MPMX26_02252 0.79 -2.0
2,319,323 - MPMX26_02252 0.79 -1.0
2,319,323 - MPMX26_02252 0.79 -1.5
2,319,368 - MPMX26_02252 0.82 -1.4
2,319,369 - MPMX26_02252 0.83 -1.1
2,319,369 - MPMX26_02252 0.83 -0.8
2,319,390 - MPMX26_02252 0.84 -1.9
2,319,395 - MPMX26_02252 0.85 -0.2
2,319,405 - MPMX26_02252 0.85 -1.1
2,319,424 - MPMX26_02252 0.87 -1.6
2,319,466 - +0.5
2,319,526 - -1.1
2,319,567 - -2.0
2,319,567 - -2.9
2,319,567 - -0.9
2,319,567 - -1.1
2,319,572 - +0.4
2,319,922 + MPMX26_02253 0.23 -2.4
2,319,955 + MPMX26_02253 0.31 -1.4
2,319,961 + MPMX26_02253 0.33 -2.9
2,319,968 + MPMX26_02253 0.34 -2.8
2,319,971 + MPMX26_02253 0.35 -2.2
2,320,048 + MPMX26_02253 0.53 -2.5
2,320,084 + MPMX26_02253 0.62 -1.9
2,320,198 + MPMX26_02253 0.89 -1.8
2,320,198 + MPMX26_02253 0.89 -2.6
2,320,219 + -2.6
2,320,541 - MPMX26_02254 0.26 +0.1
2,320,542 - MPMX26_02254 0.27 -0.1
2,320,603 - -0.0
2,320,603 - -0.1
2,320,720 - +2.1
2,320,761 - +0.4
2,320,796 - +0.2
2,320,872 - -0.0
2,320,886 - +0.5
2,320,953 - MPMX26_02255 0.13 -0.7
2,321,148 - MPMX26_02255 0.22 +1.4

Or see this region's nucleotide sequence