Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02020

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02018 and MPMX26_02019 are separated by 58 nucleotidesMPMX26_02019 and MPMX26_02020 are separated by 124 nucleotidesMPMX26_02020 and MPMX26_02021 are separated by 192 nucleotides MPMX26_02018: MPMX26_02018 - hypothetical protein, at 2,081,743 to 2,082,375 _02018 MPMX26_02019: MPMX26_02019 - hypothetical protein, at 2,082,434 to 2,082,814 _02019 MPMX26_02020: MPMX26_02020 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 2,082,939 to 2,085,185 _02020 MPMX26_02021: MPMX26_02021 - Bifunctional chorismate mutase/prephenate dehydratase, at 2,085,378 to 2,086,487 _02021 Position (kb) 2082 2083 2084 2085 2086Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2081.945 kb on + strand, within MPMX26_02018at 2081.945 kb on + strand, within MPMX26_02018at 2081.950 kb on + strand, within MPMX26_02018at 2081.950 kb on + strand, within MPMX26_02018at 2082.025 kb on + strand, within MPMX26_02018at 2082.076 kb on + strand, within MPMX26_02018at 2082.109 kb on + strand, within MPMX26_02018at 2082.109 kb on + strand, within MPMX26_02018at 2082.109 kb on + strand, within MPMX26_02018at 2082.109 kb on + strand, within MPMX26_02018at 2082.109 kb on + strand, within MPMX26_02018at 2082.119 kb on + strand, within MPMX26_02018at 2082.119 kb on + strand, within MPMX26_02018at 2082.119 kb on + strand, within MPMX26_02018at 2082.119 kb on + strand, within MPMX26_02018at 2082.119 kb on + strand, within MPMX26_02018at 2082.119 kb on + strand, within MPMX26_02018at 2082.119 kb on + strand, within MPMX26_02018at 2082.210 kb on + strand, within MPMX26_02018at 2082.263 kb on + strand, within MPMX26_02018at 2082.263 kb on + strand, within MPMX26_02018at 2082.297 kb on + strand, within MPMX26_02018at 2082.326 kb on + strandat 2082.326 kb on + strandat 2082.326 kb on + strandat 2082.326 kb on + strandat 2082.326 kb on + strandat 2082.326 kb on + strandat 2082.454 kb on + strandat 2082.545 kb on - strand, within MPMX26_02019at 2082.550 kb on - strand, within MPMX26_02019at 2082.550 kb on - strand, within MPMX26_02019at 2082.958 kb on - strandat 2082.958 kb on - strandat 2083.076 kb on - strandat 2083.188 kb on - strand, within MPMX26_02020at 2083.271 kb on - strand, within MPMX26_02020at 2083.271 kb on - strand, within MPMX26_02020at 2083.271 kb on - strand, within MPMX26_02020at 2083.271 kb on - strand, within MPMX26_02020at 2083.271 kb on - strand, within MPMX26_02020at 2083.271 kb on - strand, within MPMX26_02020at 2083.361 kb on - strand, within MPMX26_02020at 2083.442 kb on - strand, within MPMX26_02020at 2083.452 kb on - strand, within MPMX26_02020at 2083.452 kb on - strand, within MPMX26_02020at 2083.452 kb on - strand, within MPMX26_02020at 2083.490 kb on - strand, within MPMX26_02020at 2083.490 kb on - strand, within MPMX26_02020at 2083.490 kb on - strand, within MPMX26_02020at 2083.599 kb on - strand, within MPMX26_02020at 2083.647 kb on - strand, within MPMX26_02020at 2083.647 kb on - strand, within MPMX26_02020at 2083.734 kb on - strand, within MPMX26_02020at 2083.766 kb on - strand, within MPMX26_02020at 2083.822 kb on - strand, within MPMX26_02020at 2083.860 kb on - strand, within MPMX26_02020at 2083.889 kb on - strand, within MPMX26_02020at 2083.928 kb on - strand, within MPMX26_02020at 2083.938 kb on - strand, within MPMX26_02020at 2083.974 kb on - strand, within MPMX26_02020at 2084.032 kb on - strand, within MPMX26_02020at 2084.094 kb on - strand, within MPMX26_02020at 2084.117 kb on - strand, within MPMX26_02020at 2084.189 kb on - strand, within MPMX26_02020at 2084.216 kb on - strand, within MPMX26_02020at 2084.216 kb on - strand, within MPMX26_02020at 2084.340 kb on - strand, within MPMX26_02020at 2084.346 kb on - strand, within MPMX26_02020at 2084.346 kb on - strand, within MPMX26_02020at 2084.346 kb on - strand, within MPMX26_02020at 2084.346 kb on - strand, within MPMX26_02020at 2084.616 kb on - strand, within MPMX26_02020at 2084.682 kb on - strand, within MPMX26_02020at 2084.750 kb on - strand, within MPMX26_02020at 2084.790 kb on - strand, within MPMX26_02020at 2084.847 kb on - strand, within MPMX26_02020at 2084.847 kb on - strand, within MPMX26_02020at 2084.852 kb on - strand, within MPMX26_02020at 2084.859 kb on - strand, within MPMX26_02020at 2084.859 kb on - strand, within MPMX26_02020at 2084.882 kb on - strand, within MPMX26_02020at 2084.894 kb on - strand, within MPMX26_02020at 2084.924 kb on - strand, within MPMX26_02020at 2084.931 kb on - strand, within MPMX26_02020at 2084.931 kb on - strand, within MPMX26_02020at 2084.970 kb on - strandat 2084.975 kb on - strandat 2084.975 kb on - strandat 2084.999 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.021 kb on - strandat 2085.128 kb on - strandat 2085.128 kb on - strandat 2085.128 kb on - strandat 2085.128 kb on - strandat 2085.251 kb on - strandat 2085.367 kb on - strandat 2085.376 kb on - strandat 2085.376 kb on - strandat 2085.383 kb on - strandat 2085.383 kb on - strandat 2085.383 kb on - strandat 2085.383 kb on - strandat 2085.386 kb on - strandat 2085.419 kb on - strandat 2085.426 kb on - strandat 2085.426 kb on - strandat 2085.465 kb on - strandat 2085.529 kb on - strand, within MPMX26_02021at 2085.539 kb on - strand, within MPMX26_02021at 2085.539 kb on - strand, within MPMX26_02021at 2085.539 kb on - strand, within MPMX26_02021at 2085.539 kb on - strand, within MPMX26_02021at 2085.539 kb on - strand, within MPMX26_02021at 2085.539 kb on - strand, within MPMX26_02021at 2085.546 kb on - strand, within MPMX26_02021at 2085.551 kb on - strand, within MPMX26_02021at 2085.551 kb on - strand, within MPMX26_02021at 2085.551 kb on - strand, within MPMX26_02021at 2085.561 kb on - strand, within MPMX26_02021at 2085.611 kb on - strand, within MPMX26_02021at 2085.611 kb on - strand, within MPMX26_02021at 2085.650 kb on - strand, within MPMX26_02021at 2085.702 kb on - strand, within MPMX26_02021at 2085.709 kb on - strand, within MPMX26_02021at 2085.774 kb on - strand, within MPMX26_02021at 2085.813 kb on - strand, within MPMX26_02021at 2085.826 kb on - strand, within MPMX26_02021at 2085.841 kb on - strand, within MPMX26_02021at 2085.843 kb on - strand, within MPMX26_02021at 2085.852 kb on - strand, within MPMX26_02021at 2085.855 kb on - strand, within MPMX26_02021at 2085.856 kb on - strand, within MPMX26_02021at 2085.867 kb on - strand, within MPMX26_02021at 2085.877 kb on - strand, within MPMX26_02021at 2085.877 kb on - strand, within MPMX26_02021at 2085.877 kb on - strand, within MPMX26_02021at 2085.877 kb on - strand, within MPMX26_02021at 2085.877 kb on - strand, within MPMX26_02021at 2085.883 kb on - strand, within MPMX26_02021at 2085.883 kb on - strand, within MPMX26_02021at 2085.892 kb on - strand, within MPMX26_02021at 2085.964 kb on - strand, within MPMX26_02021at 2085.964 kb on - strand, within MPMX26_02021at 2085.964 kb on - strand, within MPMX26_02021at 2085.964 kb on - strand, within MPMX26_02021at 2085.988 kb on - strand, within MPMX26_02021at 2085.988 kb on - strand, within MPMX26_02021at 2085.988 kb on - strand, within MPMX26_02021at 2085.989 kb on - strand, within MPMX26_02021at 2085.997 kb on - strand, within MPMX26_02021at 2086.007 kb on - strand, within MPMX26_02021at 2086.007 kb on - strand, within MPMX26_02021at 2086.014 kb on - strand, within MPMX26_02021at 2086.021 kb on - strand, within MPMX26_02021at 2086.040 kb on - strand, within MPMX26_02021at 2086.040 kb on - strand, within MPMX26_02021at 2086.051 kb on - strand, within MPMX26_02021at 2086.051 kb on - strand, within MPMX26_02021at 2086.051 kb on - strand, within MPMX26_02021at 2086.121 kb on - strand, within MPMX26_02021at 2086.121 kb on - strand, within MPMX26_02021at 2086.121 kb on - strand, within MPMX26_02021at 2086.162 kb on - strand, within MPMX26_02021at 2086.165 kb on - strand, within MPMX26_02021

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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2,081,945 + MPMX26_02018 0.32 -0.1
2,081,945 + MPMX26_02018 0.32 +0.1
2,081,950 + MPMX26_02018 0.33 +0.3
2,081,950 + MPMX26_02018 0.33 -0.6
2,082,025 + MPMX26_02018 0.45 -0.2
2,082,076 + MPMX26_02018 0.53 +0.1
2,082,109 + MPMX26_02018 0.58 +0.0
2,082,109 + MPMX26_02018 0.58 -0.1
2,082,109 + MPMX26_02018 0.58 -0.0
2,082,109 + MPMX26_02018 0.58 -0.1
2,082,109 + MPMX26_02018 0.58 +0.3
2,082,119 + MPMX26_02018 0.59 +0.1
2,082,119 + MPMX26_02018 0.59 -0.0
2,082,119 + MPMX26_02018 0.59 -0.1
2,082,119 + MPMX26_02018 0.59 +0.4
2,082,119 + MPMX26_02018 0.59 +0.1
2,082,119 + MPMX26_02018 0.59 -0.3
2,082,119 + MPMX26_02018 0.59 +0.5
2,082,210 + MPMX26_02018 0.74 -0.3
2,082,263 + MPMX26_02018 0.82 +0.7
2,082,263 + MPMX26_02018 0.82 +0.2
2,082,297 + MPMX26_02018 0.88 -0.4
2,082,326 + +0.3
2,082,326 + +1.4
2,082,326 + -0.8
2,082,326 + +0.3
2,082,326 + +0.4
2,082,326 + +0.0
2,082,454 + -0.3
2,082,545 - MPMX26_02019 0.29 +0.8
2,082,550 - MPMX26_02019 0.30 +1.8
2,082,550 - MPMX26_02019 0.30 +0.8
2,082,958 - -0.2
2,082,958 - -0.4
2,083,076 - -1.0
2,083,188 - MPMX26_02020 0.11 -0.3
2,083,271 - MPMX26_02020 0.15 -1.3
2,083,271 - MPMX26_02020 0.15 -2.1
2,083,271 - MPMX26_02020 0.15 -1.3
2,083,271 - MPMX26_02020 0.15 -0.6
2,083,271 - MPMX26_02020 0.15 +0.4
2,083,271 - MPMX26_02020 0.15 -0.3
2,083,361 - MPMX26_02020 0.19 -1.7
2,083,442 - MPMX26_02020 0.22 -1.4
2,083,452 - MPMX26_02020 0.23 -0.6
2,083,452 - MPMX26_02020 0.23 -0.8
2,083,452 - MPMX26_02020 0.23 -0.3
2,083,490 - MPMX26_02020 0.25 +0.4
2,083,490 - MPMX26_02020 0.25 -0.6
2,083,490 - MPMX26_02020 0.25 -0.8
2,083,599 - MPMX26_02020 0.29 -0.3
2,083,647 - MPMX26_02020 0.32 -1.0
2,083,647 - MPMX26_02020 0.32 -0.8
2,083,734 - MPMX26_02020 0.35 -1.0
2,083,766 - MPMX26_02020 0.37 +0.4
2,083,822 - MPMX26_02020 0.39 +0.4
2,083,860 - MPMX26_02020 0.41 -0.3
2,083,889 - MPMX26_02020 0.42 +0.0
2,083,928 - MPMX26_02020 0.44 -0.6
2,083,938 - MPMX26_02020 0.44 -1.3
2,083,974 - MPMX26_02020 0.46 -1.3
2,084,032 - MPMX26_02020 0.49 +0.0
2,084,094 - MPMX26_02020 0.51 -0.3
2,084,117 - MPMX26_02020 0.52 -1.4
2,084,189 - MPMX26_02020 0.56 -0.6
2,084,216 - MPMX26_02020 0.57 +2.0
2,084,216 - MPMX26_02020 0.57 -1.7
2,084,340 - MPMX26_02020 0.62 -2.2
2,084,346 - MPMX26_02020 0.63 -2.1
2,084,346 - MPMX26_02020 0.63 +1.0
2,084,346 - MPMX26_02020 0.63 -1.1
2,084,346 - MPMX26_02020 0.63 -0.8
2,084,616 - MPMX26_02020 0.75 -1.0
2,084,682 - MPMX26_02020 0.78 -0.3
2,084,750 - MPMX26_02020 0.81 -0.3
2,084,790 - MPMX26_02020 0.82 -1.0
2,084,847 - MPMX26_02020 0.85 -1.9
2,084,847 - MPMX26_02020 0.85 -0.8
2,084,852 - MPMX26_02020 0.85 -1.4
2,084,859 - MPMX26_02020 0.85 -0.6
2,084,859 - MPMX26_02020 0.85 -1.3
2,084,882 - MPMX26_02020 0.86 -0.6
2,084,894 - MPMX26_02020 0.87 -2.0
2,084,924 - MPMX26_02020 0.88 -1.3
2,084,931 - MPMX26_02020 0.89 -1.1
2,084,931 - MPMX26_02020 0.89 -1.6
2,084,970 - +0.4
2,084,975 - -0.8
2,084,975 - -0.6
2,084,999 - -1.3
2,085,021 - -1.0
2,085,021 - -0.8
2,085,021 - +0.0
2,085,021 - +0.4
2,085,021 - -1.4
2,085,021 - -0.6
2,085,021 - -0.6
2,085,021 - -2.0
2,085,021 - -0.3
2,085,021 - -0.8
2,085,021 - -1.7
2,085,021 - -1.7
2,085,021 - +0.0
2,085,021 - -1.4
2,085,021 - -0.3
2,085,021 - -2.9
2,085,021 - -0.3
2,085,021 - -1.3
2,085,021 - -0.6
2,085,128 - +0.4
2,085,128 - +1.0
2,085,128 - +0.4
2,085,128 - -2.4
2,085,251 - +1.0
2,085,367 - +0.4
2,085,376 - -0.3
2,085,376 - +0.5
2,085,383 - -0.3
2,085,383 - +0.6
2,085,383 - -0.2
2,085,383 - +1.6
2,085,386 - -0.1
2,085,419 - -2.0
2,085,426 - -1.8
2,085,426 - -1.9
2,085,465 - -2.1
2,085,529 - MPMX26_02021 0.14 -0.7
2,085,539 - MPMX26_02021 0.15 -1.6
2,085,539 - MPMX26_02021 0.15 -0.6
2,085,539 - MPMX26_02021 0.15 -1.4
2,085,539 - MPMX26_02021 0.15 -1.6
2,085,539 - MPMX26_02021 0.15 -3.9
2,085,539 - MPMX26_02021 0.15 -2.3
2,085,546 - MPMX26_02021 0.15 -4.7
2,085,551 - MPMX26_02021 0.16 -3.9
2,085,551 - MPMX26_02021 0.16 -1.8
2,085,551 - MPMX26_02021 0.16 -2.6
2,085,561 - MPMX26_02021 0.16 -0.8
2,085,611 - MPMX26_02021 0.21 -1.9
2,085,611 - MPMX26_02021 0.21 -3.5
2,085,650 - MPMX26_02021 0.25 -2.8
2,085,702 - MPMX26_02021 0.29 -2.6
2,085,709 - MPMX26_02021 0.30 -1.8
2,085,774 - MPMX26_02021 0.36 -2.7
2,085,813 - MPMX26_02021 0.39 -2.3
2,085,826 - MPMX26_02021 0.40 -1.3
2,085,841 - MPMX26_02021 0.42 -2.4
2,085,843 - MPMX26_02021 0.42 -2.0
2,085,852 - MPMX26_02021 0.43 -2.8
2,085,855 - MPMX26_02021 0.43 -2.4
2,085,856 - MPMX26_02021 0.43 -2.2
2,085,867 - MPMX26_02021 0.44 -2.7
2,085,877 - MPMX26_02021 0.45 -1.4
2,085,877 - MPMX26_02021 0.45 +0.0
2,085,877 - MPMX26_02021 0.45 -0.3
2,085,877 - MPMX26_02021 0.45 -0.3
2,085,877 - MPMX26_02021 0.45 -0.3
2,085,883 - MPMX26_02021 0.45 -2.4
2,085,883 - MPMX26_02021 0.45 -2.3
2,085,892 - MPMX26_02021 0.46 -1.6
2,085,964 - MPMX26_02021 0.53 +0.0
2,085,964 - MPMX26_02021 0.53 -0.3
2,085,964 - MPMX26_02021 0.53 -0.3
2,085,964 - MPMX26_02021 0.53 -0.3
2,085,988 - MPMX26_02021 0.55 -1.4
2,085,988 - MPMX26_02021 0.55 +0.4
2,085,988 - MPMX26_02021 0.55 -0.3
2,085,989 - MPMX26_02021 0.55 -2.4
2,085,997 - MPMX26_02021 0.56 +0.4
2,086,007 - MPMX26_02021 0.57 -0.8
2,086,007 - MPMX26_02021 0.57 -3.1
2,086,014 - MPMX26_02021 0.57 -2.1
2,086,021 - MPMX26_02021 0.58 -1.6
2,086,040 - MPMX26_02021 0.60 -1.4
2,086,040 - MPMX26_02021 0.60 -2.4
2,086,051 - MPMX26_02021 0.61 -0.8
2,086,051 - MPMX26_02021 0.61 -1.8
2,086,051 - MPMX26_02021 0.61 -0.8
2,086,121 - MPMX26_02021 0.67 -1.6
2,086,121 - MPMX26_02021 0.67 -2.5
2,086,121 - MPMX26_02021 0.67 -1.0
2,086,162 - MPMX26_02021 0.71 +0.0
2,086,165 - MPMX26_02021 0.71 -0.6

Or see this region's nucleotide sequence