Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02008 and MPMX26_02009 are separated by 340 nucleotides MPMX26_02009 and MPMX26_02010 are separated by 183 nucleotides MPMX26_02010 and MPMX26_02011 are separated by 34 nucleotides
MPMX26_02008: MPMX26_02008 - hypothetical protein, at 2,071,064 to 2,074,921
_02008
MPMX26_02009: MPMX26_02009 - Alkyl hydroperoxide reductase C, at 2,075,262 to 2,075,825
_02009
MPMX26_02010: MPMX26_02010 - hypothetical protein, at 2,076,009 to 2,076,215
_02010
MPMX26_02011: MPMX26_02011 - tRNA 5-hydroxyuridine methyltransferase, at 2,076,250 to 2,076,834
_02011
Position (kb)
2075
2076 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2074.281 kb on - strand, within MPMX26_02008 at 2074.281 kb on - strand, within MPMX26_02008 at 2074.348 kb on - strand, within MPMX26_02008 at 2074.432 kb on - strand, within MPMX26_02008 at 2074.432 kb on - strand, within MPMX26_02008 at 2074.432 kb on - strand, within MPMX26_02008 at 2074.432 kb on - strand, within MPMX26_02008 at 2074.473 kb on - strand, within MPMX26_02008 at 2074.475 kb on - strand, within MPMX26_02008 at 2074.475 kb on - strand, within MPMX26_02008 at 2074.475 kb on - strand, within MPMX26_02008 at 2074.543 kb on - strand at 2074.563 kb on - strand at 2074.563 kb on - strand at 2074.563 kb on - strand at 2074.563 kb on - strand at 2074.563 kb on - strand at 2074.586 kb on - strand at 2074.596 kb on - strand at 2074.596 kb on - strand at 2074.597 kb on - strand at 2074.635 kb on - strand at 2074.637 kb on - strand at 2074.648 kb on - strand at 2074.723 kb on - strand at 2074.782 kb on - strand at 2074.793 kb on - strand at 2074.921 kb on - strand at 2074.921 kb on - strand at 2074.921 kb on - strand at 2074.921 kb on - strand at 2074.921 kb on - strand at 2074.921 kb on - strand at 2074.921 kb on - strand at 2075.241 kb on + strand at 2075.241 kb on + strand at 2075.241 kb on + strand at 2075.291 kb on + strand at 2075.338 kb on + strand, within MPMX26_02009 at 2075.352 kb on + strand, within MPMX26_02009 at 2075.359 kb on + strand, within MPMX26_02009 at 2075.364 kb on + strand, within MPMX26_02009 at 2075.364 kb on + strand, within MPMX26_02009 at 2075.364 kb on + strand, within MPMX26_02009 at 2075.377 kb on + strand, within MPMX26_02009 at 2075.429 kb on + strand, within MPMX26_02009 at 2075.429 kb on + strand, within MPMX26_02009 at 2075.431 kb on + strand, within MPMX26_02009 at 2075.448 kb on + strand, within MPMX26_02009 at 2075.448 kb on + strand, within MPMX26_02009 at 2075.450 kb on + strand, within MPMX26_02009 at 2075.515 kb on + strand, within MPMX26_02009 at 2075.589 kb on + strand, within MPMX26_02009 at 2075.589 kb on + strand, within MPMX26_02009 at 2075.610 kb on + strand, within MPMX26_02009 at 2075.647 kb on + strand, within MPMX26_02009 at 2075.647 kb on + strand, within MPMX26_02009 at 2075.661 kb on + strand, within MPMX26_02009 at 2075.661 kb on + strand, within MPMX26_02009 at 2075.686 kb on + strand, within MPMX26_02009 at 2075.695 kb on + strand, within MPMX26_02009 at 2075.695 kb on + strand, within MPMX26_02009 at 2075.695 kb on + strand, within MPMX26_02009 at 2075.695 kb on + strand, within MPMX26_02009 at 2075.695 kb on + strand, within MPMX26_02009 at 2075.695 kb on + strand, within MPMX26_02009 at 2075.714 kb on + strand, within MPMX26_02009 at 2075.738 kb on + strand, within MPMX26_02009 at 2075.748 kb on + strand, within MPMX26_02009 at 2075.748 kb on + strand, within MPMX26_02009 at 2075.748 kb on + strand, within MPMX26_02009 at 2075.748 kb on + strand, within MPMX26_02009 at 2075.748 kb on + strand, within MPMX26_02009 at 2075.788 kb on + strand at 2075.835 kb on + strand at 2076.271 kb on - strand at 2076.471 kb on + strand, within MPMX26_02011
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 2,074,281 - MPMX26_02008 0.83 -0.6 2,074,281 - MPMX26_02008 0.83 -1.0 2,074,348 - MPMX26_02008 0.85 +0.1 2,074,432 - MPMX26_02008 0.87 -0.3 2,074,432 - MPMX26_02008 0.87 +0.5 2,074,432 - MPMX26_02008 0.87 +0.2 2,074,432 - MPMX26_02008 0.87 +0.7 2,074,473 - MPMX26_02008 0.88 -0.1 2,074,475 - MPMX26_02008 0.88 -0.6 2,074,475 - MPMX26_02008 0.88 -0.5 2,074,475 - MPMX26_02008 0.88 -0.6 2,074,543 - +0.4 2,074,563 - +1.2 2,074,563 - -0.0 2,074,563 - +0.5 2,074,563 - +0.4 2,074,563 - -0.6 2,074,586 - -0.1 2,074,596 - +0.2 2,074,596 - -0.9 2,074,597 - +0.1 2,074,635 - -1.2 2,074,637 - +0.2 2,074,648 - -0.1 2,074,723 - -0.1 2,074,782 - -1.2 2,074,793 - -0.1 2,074,921 - +0.3 2,074,921 - -0.2 2,074,921 - +0.4 2,074,921 - +0.8 2,074,921 - +0.2 2,074,921 - +0.1 2,074,921 - -0.1 2,075,241 + -2.4 2,075,241 + -3.6 2,075,241 + -3.2 2,075,291 + -4.0 2,075,338 + MPMX26_02009 0.13 -3.5 2,075,352 + MPMX26_02009 0.16 -4.5 2,075,359 + MPMX26_02009 0.17 -4.3 2,075,364 + MPMX26_02009 0.18 -4.1 2,075,364 + MPMX26_02009 0.18 -3.6 2,075,364 + MPMX26_02009 0.18 -4.5 2,075,377 + MPMX26_02009 0.20 -4.4 2,075,429 + MPMX26_02009 0.30 -3.1 2,075,429 + MPMX26_02009 0.30 -3.8 2,075,431 + MPMX26_02009 0.30 -2.8 2,075,448 + MPMX26_02009 0.33 -1.5 2,075,448 + MPMX26_02009 0.33 -3.1 2,075,450 + MPMX26_02009 0.33 -3.5 2,075,515 + MPMX26_02009 0.45 -3.8 2,075,589 + MPMX26_02009 0.58 -2.5 2,075,589 + MPMX26_02009 0.58 -3.1 2,075,610 + MPMX26_02009 0.62 -3.6 2,075,647 + MPMX26_02009 0.68 -4.2 2,075,647 + MPMX26_02009 0.68 -3.2 2,075,661 + MPMX26_02009 0.71 -2.4 2,075,661 + MPMX26_02009 0.71 -1.2 2,075,686 + MPMX26_02009 0.75 -3.0 2,075,695 + MPMX26_02009 0.77 -2.8 2,075,695 + MPMX26_02009 0.77 -3.0 2,075,695 + MPMX26_02009 0.77 -3.5 2,075,695 + MPMX26_02009 0.77 -4.6 2,075,695 + MPMX26_02009 0.77 -3.8 2,075,695 + MPMX26_02009 0.77 -3.0 2,075,714 + MPMX26_02009 0.80 -3.2 2,075,738 + MPMX26_02009 0.84 -3.9 2,075,748 + MPMX26_02009 0.86 -3.2 2,075,748 + MPMX26_02009 0.86 -2.6 2,075,748 + MPMX26_02009 0.86 -3.2 2,075,748 + MPMX26_02009 0.86 -3.2 2,075,748 + MPMX26_02009 0.86 -2.8 2,075,788 + -1.5 2,075,835 + -0.2 2,076,271 - +0.1 2,076,471 + MPMX26_02011 0.38 -0.1
Or see this region's nucleotide sequence