Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01162

Experiment: L-Arginine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_01161 and MPMX26_01162 are separated by 3 nucleotidesMPMX26_01162 and MPMX26_01163 are separated by 292 nucleotides MPMX26_01161: MPMX26_01161 - Cytochrome bo(3) ubiquinol oxidase subunit 1, at 1,226,537 to 1,228,519 _01161 MPMX26_01162: MPMX26_01162 - Cytochrome bo(3) ubiquinol oxidase subunit 2, at 1,228,523 to 1,229,590 _01162 MPMX26_01163: MPMX26_01163 - hypothetical protein, at 1,229,883 to 1,230,650 _01163 Position (kb) 1228 1229 1230Strain fitness (log2 ratio) -2 -1 0 1 2at 1227.529 kb on + strand, within MPMX26_01161at 1227.535 kb on + strand, within MPMX26_01161at 1227.545 kb on - strand, within MPMX26_01161at 1227.598 kb on - strand, within MPMX26_01161at 1227.664 kb on - strand, within MPMX26_01161at 1227.774 kb on - strand, within MPMX26_01161at 1227.790 kb on - strand, within MPMX26_01161at 1227.791 kb on + strand, within MPMX26_01161at 1227.811 kb on + strand, within MPMX26_01161at 1227.814 kb on - strand, within MPMX26_01161at 1227.816 kb on + strand, within MPMX26_01161at 1227.816 kb on + strand, within MPMX26_01161at 1227.824 kb on - strand, within MPMX26_01161at 1227.829 kb on - strand, within MPMX26_01161at 1227.834 kb on - strand, within MPMX26_01161at 1227.870 kb on + strand, within MPMX26_01161at 1227.909 kb on + strand, within MPMX26_01161at 1228.002 kb on + strand, within MPMX26_01161at 1228.010 kb on - strand, within MPMX26_01161at 1228.018 kb on - strand, within MPMX26_01161at 1228.095 kb on + strand, within MPMX26_01161at 1228.095 kb on + strand, within MPMX26_01161at 1228.103 kb on - strand, within MPMX26_01161at 1228.105 kb on - strand, within MPMX26_01161at 1228.179 kb on - strand, within MPMX26_01161at 1228.242 kb on + strand, within MPMX26_01161at 1228.249 kb on - strand, within MPMX26_01161at 1228.268 kb on - strand, within MPMX26_01161at 1228.276 kb on + strand, within MPMX26_01161at 1228.284 kb on - strand, within MPMX26_01161at 1228.313 kb on - strand, within MPMX26_01161at 1228.366 kb on + strandat 1228.374 kb on - strandat 1228.374 kb on - strandat 1228.442 kb on + strandat 1228.442 kb on + strandat 1228.461 kb on + strandat 1228.469 kb on - strandat 1228.474 kb on + strandat 1228.484 kb on + strandat 1228.484 kb on + strandat 1228.588 kb on - strandat 1228.597 kb on - strandat 1228.597 kb on - strandat 1228.603 kb on + strandat 1228.607 kb on - strandat 1228.611 kb on - strandat 1228.611 kb on - strandat 1228.611 kb on - strandat 1228.611 kb on - strandat 1228.611 kb on - strandat 1228.710 kb on - strand, within MPMX26_01162at 1228.884 kb on - strand, within MPMX26_01162at 1228.955 kb on + strand, within MPMX26_01162at 1228.963 kb on - strand, within MPMX26_01162at 1228.970 kb on - strand, within MPMX26_01162at 1229.043 kb on + strand, within MPMX26_01162at 1229.048 kb on + strand, within MPMX26_01162at 1229.048 kb on + strand, within MPMX26_01162at 1229.048 kb on + strand, within MPMX26_01162at 1229.048 kb on + strand, within MPMX26_01162at 1229.056 kb on - strand, within MPMX26_01162at 1229.056 kb on - strand, within MPMX26_01162at 1229.056 kb on - strand, within MPMX26_01162at 1229.056 kb on - strand, within MPMX26_01162at 1229.056 kb on - strand, within MPMX26_01162at 1229.159 kb on + strand, within MPMX26_01162at 1229.192 kb on - strand, within MPMX26_01162at 1229.192 kb on - strand, within MPMX26_01162at 1229.192 kb on - strand, within MPMX26_01162at 1229.204 kb on + strand, within MPMX26_01162at 1229.236 kb on + strand, within MPMX26_01162at 1229.250 kb on + strand, within MPMX26_01162at 1229.251 kb on + strand, within MPMX26_01162at 1229.251 kb on + strand, within MPMX26_01162at 1229.259 kb on - strand, within MPMX26_01162at 1229.285 kb on + strand, within MPMX26_01162at 1229.324 kb on - strand, within MPMX26_01162at 1229.358 kb on + strand, within MPMX26_01162at 1229.366 kb on - strand, within MPMX26_01162at 1229.366 kb on - strand, within MPMX26_01162at 1229.366 kb on - strand, within MPMX26_01162at 1229.366 kb on - strand, within MPMX26_01162at 1229.366 kb on - strand, within MPMX26_01162at 1229.405 kb on + strand, within MPMX26_01162at 1229.482 kb on - strand, within MPMX26_01162at 1229.543 kb on - strandat 1229.556 kb on + strandat 1229.569 kb on - strandat 1229.569 kb on - strandat 1229.711 kb on - strandat 1229.746 kb on - strandat 1230.069 kb on - strand, within MPMX26_01163at 1230.069 kb on - strand, within MPMX26_01163at 1230.113 kb on - strand, within MPMX26_01163at 1230.113 kb on - strand, within MPMX26_01163at 1230.113 kb on - strand, within MPMX26_01163at 1230.113 kb on - strand, within MPMX26_01163at 1230.113 kb on - strand, within MPMX26_01163at 1230.123 kb on - strand, within MPMX26_01163at 1230.123 kb on - strand, within MPMX26_01163at 1230.131 kb on - strand, within MPMX26_01163at 1230.131 kb on - strand, within MPMX26_01163at 1230.131 kb on - strand, within MPMX26_01163at 1230.131 kb on - strand, within MPMX26_01163at 1230.131 kb on - strand, within MPMX26_01163at 1230.141 kb on - strand, within MPMX26_01163at 1230.326 kb on - strand, within MPMX26_01163at 1230.327 kb on - strand, within MPMX26_01163at 1230.327 kb on - strand, within MPMX26_01163at 1230.327 kb on - strand, within MPMX26_01163at 1230.327 kb on - strand, within MPMX26_01163at 1230.327 kb on - strand, within MPMX26_01163at 1230.465 kb on - strand, within MPMX26_01163at 1230.465 kb on - strand, within MPMX26_01163at 1230.473 kb on - strand, within MPMX26_01163at 1230.536 kb on - strand, within MPMX26_01163at 1230.543 kb on - strand, within MPMX26_01163at 1230.554 kb on - strand, within MPMX26_01163at 1230.554 kb on - strand, within MPMX26_01163at 1230.590 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
remove
1,227,529 + MPMX26_01161 0.50 +1.0
1,227,535 + MPMX26_01161 0.50 +0.0
1,227,545 - MPMX26_01161 0.51 -1.1
1,227,598 - MPMX26_01161 0.54 -0.3
1,227,664 - MPMX26_01161 0.57 +0.0
1,227,774 - MPMX26_01161 0.62 +0.0
1,227,790 - MPMX26_01161 0.63 +0.5
1,227,791 + MPMX26_01161 0.63 +0.0
1,227,811 + MPMX26_01161 0.64 -0.3
1,227,814 - MPMX26_01161 0.64 -0.5
1,227,816 + MPMX26_01161 0.64 -0.3
1,227,816 + MPMX26_01161 0.64 -2.3
1,227,824 - MPMX26_01161 0.65 +0.0
1,227,829 - MPMX26_01161 0.65 -1.0
1,227,834 - MPMX26_01161 0.65 +1.0
1,227,870 + MPMX26_01161 0.67 +0.0
1,227,909 + MPMX26_01161 0.69 -1.1
1,228,002 + MPMX26_01161 0.74 +0.5
1,228,010 - MPMX26_01161 0.74 +0.5
1,228,018 - MPMX26_01161 0.75 +0.5
1,228,095 + MPMX26_01161 0.79 +0.0
1,228,095 + MPMX26_01161 0.79 +0.0
1,228,103 - MPMX26_01161 0.79 -1.1
1,228,105 - MPMX26_01161 0.79 +0.5
1,228,179 - MPMX26_01161 0.83 -0.8
1,228,242 + MPMX26_01161 0.86 +0.0
1,228,249 - MPMX26_01161 0.86 -0.8
1,228,268 - MPMX26_01161 0.87 -0.3
1,228,276 + MPMX26_01161 0.88 -0.3
1,228,284 - MPMX26_01161 0.88 +0.5
1,228,313 - MPMX26_01161 0.90 -0.5
1,228,366 + -1.0
1,228,374 - -1.0
1,228,374 - +0.5
1,228,442 + -0.5
1,228,442 + -0.5
1,228,461 + -0.3
1,228,469 - +0.0
1,228,474 + -1.0
1,228,484 + +1.5
1,228,484 + +0.0
1,228,588 - +0.0
1,228,597 - +1.9
1,228,597 - +0.0
1,228,603 + +0.0
1,228,607 - -0.8
1,228,611 - -0.8
1,228,611 - +0.0
1,228,611 - +1.0
1,228,611 - +2.0
1,228,611 - +1.5
1,228,710 - MPMX26_01162 0.18 -0.8
1,228,884 - MPMX26_01162 0.34 +0.0
1,228,955 + MPMX26_01162 0.40 -0.8
1,228,963 - MPMX26_01162 0.41 +2.0
1,228,970 - MPMX26_01162 0.42 -0.3
1,229,043 + MPMX26_01162 0.49 -0.3
1,229,048 + MPMX26_01162 0.49 +0.0
1,229,048 + MPMX26_01162 0.49 +0.5
1,229,048 + MPMX26_01162 0.49 +0.5
1,229,048 + MPMX26_01162 0.49 +0.0
1,229,056 - MPMX26_01162 0.50 +0.0
1,229,056 - MPMX26_01162 0.50 +0.0
1,229,056 - MPMX26_01162 0.50 -0.3
1,229,056 - MPMX26_01162 0.50 -0.3
1,229,056 - MPMX26_01162 0.50 +0.0
1,229,159 + MPMX26_01162 0.60 -1.0
1,229,192 - MPMX26_01162 0.63 -0.3
1,229,192 - MPMX26_01162 0.63 +0.0
1,229,192 - MPMX26_01162 0.63 +0.5
1,229,204 + MPMX26_01162 0.64 +0.5
1,229,236 + MPMX26_01162 0.67 +2.0
1,229,250 + MPMX26_01162 0.68 -0.5
1,229,251 + MPMX26_01162 0.68 -1.9
1,229,251 + MPMX26_01162 0.68 -0.3
1,229,259 - MPMX26_01162 0.69 +1.0
1,229,285 + MPMX26_01162 0.71 +0.5
1,229,324 - MPMX26_01162 0.75 +0.5
1,229,358 + MPMX26_01162 0.78 +0.0
1,229,366 - MPMX26_01162 0.79 -0.3
1,229,366 - MPMX26_01162 0.79 +0.5
1,229,366 - MPMX26_01162 0.79 -1.4
1,229,366 - MPMX26_01162 0.79 +0.0
1,229,366 - MPMX26_01162 0.79 -0.3
1,229,405 + MPMX26_01162 0.83 -0.5
1,229,482 - MPMX26_01162 0.90 -0.3
1,229,543 - -0.5
1,229,556 + +0.0
1,229,569 - +1.0
1,229,569 - -0.8
1,229,711 - +2.0
1,229,746 - -0.3
1,230,069 - MPMX26_01163 0.24 +0.6
1,230,069 - MPMX26_01163 0.24 +0.5
1,230,113 - MPMX26_01163 0.30 +0.8
1,230,113 - MPMX26_01163 0.30 +0.2
1,230,113 - MPMX26_01163 0.30 +0.6
1,230,113 - MPMX26_01163 0.30 +0.5
1,230,113 - MPMX26_01163 0.30 +0.6
1,230,123 - MPMX26_01163 0.31 +0.2
1,230,123 - MPMX26_01163 0.31 +1.1
1,230,131 - MPMX26_01163 0.32 +0.1
1,230,131 - MPMX26_01163 0.32 +0.2
1,230,131 - MPMX26_01163 0.32 -0.1
1,230,131 - MPMX26_01163 0.32 +0.7
1,230,131 - MPMX26_01163 0.32 +0.8
1,230,141 - MPMX26_01163 0.34 +0.4
1,230,326 - MPMX26_01163 0.58 +0.2
1,230,327 - MPMX26_01163 0.58 +0.1
1,230,327 - MPMX26_01163 0.58 -0.2
1,230,327 - MPMX26_01163 0.58 +0.3
1,230,327 - MPMX26_01163 0.58 +0.6
1,230,327 - MPMX26_01163 0.58 +0.5
1,230,465 - MPMX26_01163 0.76 +0.8
1,230,465 - MPMX26_01163 0.76 +0.6
1,230,473 - MPMX26_01163 0.77 +1.1
1,230,536 - MPMX26_01163 0.85 +0.4
1,230,543 - MPMX26_01163 0.86 +0.1
1,230,554 - MPMX26_01163 0.87 +0.9
1,230,554 - MPMX26_01163 0.87 +0.4
1,230,590 - +0.5

Or see this region's nucleotide sequence