Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01161 and MPMX26_01162 are separated by 3 nucleotides MPMX26_01162 and MPMX26_01163 are separated by 292 nucleotides
MPMX26_01161: MPMX26_01161 - Cytochrome bo(3) ubiquinol oxidase subunit 1, at 1,226,537 to 1,228,519
_01161
MPMX26_01162: MPMX26_01162 - Cytochrome bo(3) ubiquinol oxidase subunit 2, at 1,228,523 to 1,229,590
_01162
MPMX26_01163: MPMX26_01163 - hypothetical protein, at 1,229,883 to 1,230,650
_01163
Position (kb)
1228
1229
1230 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1227.529 kb on + strand, within MPMX26_01161 at 1227.535 kb on + strand, within MPMX26_01161 at 1227.545 kb on - strand, within MPMX26_01161 at 1227.598 kb on - strand, within MPMX26_01161 at 1227.664 kb on - strand, within MPMX26_01161 at 1227.774 kb on - strand, within MPMX26_01161 at 1227.790 kb on - strand, within MPMX26_01161 at 1227.791 kb on + strand, within MPMX26_01161 at 1227.811 kb on + strand, within MPMX26_01161 at 1227.814 kb on - strand, within MPMX26_01161 at 1227.816 kb on + strand, within MPMX26_01161 at 1227.816 kb on + strand, within MPMX26_01161 at 1227.824 kb on - strand, within MPMX26_01161 at 1227.829 kb on - strand, within MPMX26_01161 at 1227.834 kb on - strand, within MPMX26_01161 at 1227.870 kb on + strand, within MPMX26_01161 at 1227.909 kb on + strand, within MPMX26_01161 at 1228.002 kb on + strand, within MPMX26_01161 at 1228.010 kb on - strand, within MPMX26_01161 at 1228.018 kb on - strand, within MPMX26_01161 at 1228.095 kb on + strand, within MPMX26_01161 at 1228.095 kb on + strand, within MPMX26_01161 at 1228.103 kb on - strand, within MPMX26_01161 at 1228.105 kb on - strand, within MPMX26_01161 at 1228.179 kb on - strand, within MPMX26_01161 at 1228.242 kb on + strand, within MPMX26_01161 at 1228.249 kb on - strand, within MPMX26_01161 at 1228.268 kb on - strand, within MPMX26_01161 at 1228.276 kb on + strand, within MPMX26_01161 at 1228.284 kb on - strand, within MPMX26_01161 at 1228.313 kb on - strand, within MPMX26_01161 at 1228.366 kb on + strand at 1228.374 kb on - strand at 1228.374 kb on - strand at 1228.442 kb on + strand at 1228.442 kb on + strand at 1228.461 kb on + strand at 1228.469 kb on - strand at 1228.474 kb on + strand at 1228.484 kb on + strand at 1228.484 kb on + strand at 1228.588 kb on - strand at 1228.597 kb on - strand at 1228.597 kb on - strand at 1228.603 kb on + strand at 1228.607 kb on - strand at 1228.611 kb on - strand at 1228.611 kb on - strand at 1228.611 kb on - strand at 1228.611 kb on - strand at 1228.611 kb on - strand at 1228.710 kb on - strand, within MPMX26_01162 at 1228.884 kb on - strand, within MPMX26_01162 at 1228.955 kb on + strand, within MPMX26_01162 at 1228.963 kb on - strand, within MPMX26_01162 at 1228.970 kb on - strand, within MPMX26_01162 at 1229.043 kb on + strand, within MPMX26_01162 at 1229.048 kb on + strand, within MPMX26_01162 at 1229.048 kb on + strand, within MPMX26_01162 at 1229.048 kb on + strand, within MPMX26_01162 at 1229.048 kb on + strand, within MPMX26_01162 at 1229.056 kb on - strand, within MPMX26_01162 at 1229.056 kb on - strand, within MPMX26_01162 at 1229.056 kb on - strand, within MPMX26_01162 at 1229.056 kb on - strand, within MPMX26_01162 at 1229.056 kb on - strand, within MPMX26_01162 at 1229.159 kb on + strand, within MPMX26_01162 at 1229.192 kb on - strand, within MPMX26_01162 at 1229.192 kb on - strand, within MPMX26_01162 at 1229.192 kb on - strand, within MPMX26_01162 at 1229.204 kb on + strand, within MPMX26_01162 at 1229.236 kb on + strand, within MPMX26_01162 at 1229.250 kb on + strand, within MPMX26_01162 at 1229.251 kb on + strand, within MPMX26_01162 at 1229.251 kb on + strand, within MPMX26_01162 at 1229.259 kb on - strand, within MPMX26_01162 at 1229.285 kb on + strand, within MPMX26_01162 at 1229.324 kb on - strand, within MPMX26_01162 at 1229.358 kb on + strand, within MPMX26_01162 at 1229.366 kb on - strand, within MPMX26_01162 at 1229.366 kb on - strand, within MPMX26_01162 at 1229.366 kb on - strand, within MPMX26_01162 at 1229.366 kb on - strand, within MPMX26_01162 at 1229.366 kb on - strand, within MPMX26_01162 at 1229.405 kb on + strand, within MPMX26_01162 at 1229.482 kb on - strand, within MPMX26_01162 at 1229.543 kb on - strand at 1229.556 kb on + strand at 1229.569 kb on - strand at 1229.569 kb on - strand at 1229.711 kb on - strand at 1229.746 kb on - strand at 1230.069 kb on - strand, within MPMX26_01163 at 1230.069 kb on - strand, within MPMX26_01163 at 1230.113 kb on - strand, within MPMX26_01163 at 1230.113 kb on - strand, within MPMX26_01163 at 1230.113 kb on - strand, within MPMX26_01163 at 1230.113 kb on - strand, within MPMX26_01163 at 1230.113 kb on - strand, within MPMX26_01163 at 1230.123 kb on - strand, within MPMX26_01163 at 1230.123 kb on - strand, within MPMX26_01163 at 1230.131 kb on - strand, within MPMX26_01163 at 1230.131 kb on - strand, within MPMX26_01163 at 1230.131 kb on - strand, within MPMX26_01163 at 1230.131 kb on - strand, within MPMX26_01163 at 1230.131 kb on - strand, within MPMX26_01163 at 1230.141 kb on - strand, within MPMX26_01163 at 1230.326 kb on - strand, within MPMX26_01163 at 1230.327 kb on - strand, within MPMX26_01163 at 1230.327 kb on - strand, within MPMX26_01163 at 1230.327 kb on - strand, within MPMX26_01163 at 1230.327 kb on - strand, within MPMX26_01163 at 1230.327 kb on - strand, within MPMX26_01163 at 1230.465 kb on - strand, within MPMX26_01163 at 1230.465 kb on - strand, within MPMX26_01163 at 1230.473 kb on - strand, within MPMX26_01163 at 1230.536 kb on - strand, within MPMX26_01163 at 1230.543 kb on - strand, within MPMX26_01163 at 1230.554 kb on - strand, within MPMX26_01163 at 1230.554 kb on - strand, within MPMX26_01163 at 1230.590 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 1,227,529 + MPMX26_01161 0.50 +1.0 1,227,535 + MPMX26_01161 0.50 +0.0 1,227,545 - MPMX26_01161 0.51 -1.1 1,227,598 - MPMX26_01161 0.54 -0.3 1,227,664 - MPMX26_01161 0.57 +0.0 1,227,774 - MPMX26_01161 0.62 +0.0 1,227,790 - MPMX26_01161 0.63 +0.5 1,227,791 + MPMX26_01161 0.63 +0.0 1,227,811 + MPMX26_01161 0.64 -0.3 1,227,814 - MPMX26_01161 0.64 -0.5 1,227,816 + MPMX26_01161 0.64 -0.3 1,227,816 + MPMX26_01161 0.64 -2.3 1,227,824 - MPMX26_01161 0.65 +0.0 1,227,829 - MPMX26_01161 0.65 -1.0 1,227,834 - MPMX26_01161 0.65 +1.0 1,227,870 + MPMX26_01161 0.67 +0.0 1,227,909 + MPMX26_01161 0.69 -1.1 1,228,002 + MPMX26_01161 0.74 +0.5 1,228,010 - MPMX26_01161 0.74 +0.5 1,228,018 - MPMX26_01161 0.75 +0.5 1,228,095 + MPMX26_01161 0.79 +0.0 1,228,095 + MPMX26_01161 0.79 +0.0 1,228,103 - MPMX26_01161 0.79 -1.1 1,228,105 - MPMX26_01161 0.79 +0.5 1,228,179 - MPMX26_01161 0.83 -0.8 1,228,242 + MPMX26_01161 0.86 +0.0 1,228,249 - MPMX26_01161 0.86 -0.8 1,228,268 - MPMX26_01161 0.87 -0.3 1,228,276 + MPMX26_01161 0.88 -0.3 1,228,284 - MPMX26_01161 0.88 +0.5 1,228,313 - MPMX26_01161 0.90 -0.5 1,228,366 + -1.0 1,228,374 - -1.0 1,228,374 - +0.5 1,228,442 + -0.5 1,228,442 + -0.5 1,228,461 + -0.3 1,228,469 - +0.0 1,228,474 + -1.0 1,228,484 + +1.5 1,228,484 + +0.0 1,228,588 - +0.0 1,228,597 - +1.9 1,228,597 - +0.0 1,228,603 + +0.0 1,228,607 - -0.8 1,228,611 - -0.8 1,228,611 - +0.0 1,228,611 - +1.0 1,228,611 - +2.0 1,228,611 - +1.5 1,228,710 - MPMX26_01162 0.18 -0.8 1,228,884 - MPMX26_01162 0.34 +0.0 1,228,955 + MPMX26_01162 0.40 -0.8 1,228,963 - MPMX26_01162 0.41 +2.0 1,228,970 - MPMX26_01162 0.42 -0.3 1,229,043 + MPMX26_01162 0.49 -0.3 1,229,048 + MPMX26_01162 0.49 +0.0 1,229,048 + MPMX26_01162 0.49 +0.5 1,229,048 + MPMX26_01162 0.49 +0.5 1,229,048 + MPMX26_01162 0.49 +0.0 1,229,056 - MPMX26_01162 0.50 +0.0 1,229,056 - MPMX26_01162 0.50 +0.0 1,229,056 - MPMX26_01162 0.50 -0.3 1,229,056 - MPMX26_01162 0.50 -0.3 1,229,056 - MPMX26_01162 0.50 +0.0 1,229,159 + MPMX26_01162 0.60 -1.0 1,229,192 - MPMX26_01162 0.63 -0.3 1,229,192 - MPMX26_01162 0.63 +0.0 1,229,192 - MPMX26_01162 0.63 +0.5 1,229,204 + MPMX26_01162 0.64 +0.5 1,229,236 + MPMX26_01162 0.67 +2.0 1,229,250 + MPMX26_01162 0.68 -0.5 1,229,251 + MPMX26_01162 0.68 -1.9 1,229,251 + MPMX26_01162 0.68 -0.3 1,229,259 - MPMX26_01162 0.69 +1.0 1,229,285 + MPMX26_01162 0.71 +0.5 1,229,324 - MPMX26_01162 0.75 +0.5 1,229,358 + MPMX26_01162 0.78 +0.0 1,229,366 - MPMX26_01162 0.79 -0.3 1,229,366 - MPMX26_01162 0.79 +0.5 1,229,366 - MPMX26_01162 0.79 -1.4 1,229,366 - MPMX26_01162 0.79 +0.0 1,229,366 - MPMX26_01162 0.79 -0.3 1,229,405 + MPMX26_01162 0.83 -0.5 1,229,482 - MPMX26_01162 0.90 -0.3 1,229,543 - -0.5 1,229,556 + +0.0 1,229,569 - +1.0 1,229,569 - -0.8 1,229,711 - +2.0 1,229,746 - -0.3 1,230,069 - MPMX26_01163 0.24 +0.6 1,230,069 - MPMX26_01163 0.24 +0.5 1,230,113 - MPMX26_01163 0.30 +0.8 1,230,113 - MPMX26_01163 0.30 +0.2 1,230,113 - MPMX26_01163 0.30 +0.6 1,230,113 - MPMX26_01163 0.30 +0.5 1,230,113 - MPMX26_01163 0.30 +0.6 1,230,123 - MPMX26_01163 0.31 +0.2 1,230,123 - MPMX26_01163 0.31 +1.1 1,230,131 - MPMX26_01163 0.32 +0.1 1,230,131 - MPMX26_01163 0.32 +0.2 1,230,131 - MPMX26_01163 0.32 -0.1 1,230,131 - MPMX26_01163 0.32 +0.7 1,230,131 - MPMX26_01163 0.32 +0.8 1,230,141 - MPMX26_01163 0.34 +0.4 1,230,326 - MPMX26_01163 0.58 +0.2 1,230,327 - MPMX26_01163 0.58 +0.1 1,230,327 - MPMX26_01163 0.58 -0.2 1,230,327 - MPMX26_01163 0.58 +0.3 1,230,327 - MPMX26_01163 0.58 +0.6 1,230,327 - MPMX26_01163 0.58 +0.5 1,230,465 - MPMX26_01163 0.76 +0.8 1,230,465 - MPMX26_01163 0.76 +0.6 1,230,473 - MPMX26_01163 0.77 +1.1 1,230,536 - MPMX26_01163 0.85 +0.4 1,230,543 - MPMX26_01163 0.86 +0.1 1,230,554 - MPMX26_01163 0.87 +0.9 1,230,554 - MPMX26_01163 0.87 +0.4 1,230,590 - +0.5
Or see this region's nucleotide sequence