Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00578

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00576 and MPMX26_00577 are separated by 9 nucleotidesMPMX26_00577 and MPMX26_00578 are separated by 103 nucleotidesMPMX26_00578 and MPMX26_00579 are separated by 71 nucleotidesMPMX26_00579 and MPMX26_00580 are separated by 97 nucleotides MPMX26_00576: MPMX26_00576 - Small-conductance mechanosensitive channel, at 611,358 to 612,281 _00576 MPMX26_00577: MPMX26_00577 - hypothetical protein, at 612,291 to 613,112 _00577 MPMX26_00578: MPMX26_00578 - Type II secretion system protein E, at 613,216 to 614,703 _00578 MPMX26_00579: MPMX26_00579 - Organic hydroperoxide resistance protein OhrB, at 614,775 to 615,200 _00579 MPMX26_00580: MPMX26_00580 - Deaminated glutathione amidase, at 615,298 to 616,122 _00580 Position (kb) 613 614 615Strain fitness (log2 ratio) -2 -1 0 1at 612.359 kb on - strandat 612.406 kb on + strand, within MPMX26_00577at 612.414 kb on - strand, within MPMX26_00577at 612.596 kb on - strand, within MPMX26_00577at 612.596 kb on - strand, within MPMX26_00577at 612.611 kb on - strand, within MPMX26_00577at 612.627 kb on - strand, within MPMX26_00577at 612.767 kb on - strand, within MPMX26_00577at 612.806 kb on - strand, within MPMX26_00577at 613.296 kb on + strandat 613.364 kb on + strandat 613.380 kb on + strand, within MPMX26_00578at 613.380 kb on + strand, within MPMX26_00578at 613.380 kb on + strand, within MPMX26_00578at 613.390 kb on + strand, within MPMX26_00578at 613.419 kb on + strand, within MPMX26_00578at 613.575 kb on + strand, within MPMX26_00578at 613.752 kb on + strand, within MPMX26_00578at 614.169 kb on + strand, within MPMX26_00578at 614.215 kb on + strand, within MPMX26_00578at 614.641 kb on + strandat 614.649 kb on + strandat 614.843 kb on - strand, within MPMX26_00579at 614.884 kb on - strand, within MPMX26_00579at 614.884 kb on - strand, within MPMX26_00579at 615.066 kb on - strand, within MPMX26_00579at 615.066 kb on - strand, within MPMX26_00579at 615.079 kb on - strand, within MPMX26_00579at 615.079 kb on - strand, within MPMX26_00579at 615.134 kb on - strand, within MPMX26_00579at 615.338 kb on - strandat 615.340 kb on - strandat 615.340 kb on - strandat 615.341 kb on - strandat 615.341 kb on - strandat 615.341 kb on - strandat 615.341 kb on - strandat 615.341 kb on - strandat 615.348 kb on - strandat 615.374 kb on - strandat 615.395 kb on - strand, within MPMX26_00580at 615.395 kb on - strand, within MPMX26_00580at 615.403 kb on - strand, within MPMX26_00580at 615.411 kb on - strand, within MPMX26_00580at 615.460 kb on - strand, within MPMX26_00580at 615.483 kb on - strand, within MPMX26_00580at 615.484 kb on - strand, within MPMX26_00580at 615.484 kb on - strand, within MPMX26_00580at 615.484 kb on - strand, within MPMX26_00580at 615.484 kb on - strand, within MPMX26_00580at 615.484 kb on - strand, within MPMX26_00580at 615.484 kb on - strand, within MPMX26_00580at 615.492 kb on - strand, within MPMX26_00580at 615.504 kb on - strand, within MPMX26_00580at 615.532 kb on - strand, within MPMX26_00580at 615.566 kb on - strand, within MPMX26_00580at 615.566 kb on - strand, within MPMX26_00580at 615.566 kb on - strand, within MPMX26_00580at 615.566 kb on - strand, within MPMX26_00580at 615.566 kb on - strand, within MPMX26_00580at 615.566 kb on - strand, within MPMX26_00580at 615.588 kb on - strand, within MPMX26_00580at 615.620 kb on - strand, within MPMX26_00580at 615.620 kb on - strand, within MPMX26_00580at 615.626 kb on - strand, within MPMX26_00580at 615.626 kb on - strand, within MPMX26_00580at 615.628 kb on - strand, within MPMX26_00580at 615.628 kb on - strand, within MPMX26_00580at 615.628 kb on - strand, within MPMX26_00580at 615.648 kb on - strand, within MPMX26_00580at 615.653 kb on - strand, within MPMX26_00580at 615.653 kb on - strand, within MPMX26_00580at 615.653 kb on - strand, within MPMX26_00580at 615.653 kb on - strand, within MPMX26_00580at 615.653 kb on - strand, within MPMX26_00580at 615.653 kb on - strand, within MPMX26_00580at 615.653 kb on - strand, within MPMX26_00580at 615.653 kb on - strand, within MPMX26_00580at 615.653 kb on - strand, within MPMX26_00580at 615.653 kb on - strand, within MPMX26_00580at 615.653 kb on - strand, within MPMX26_00580at 615.660 kb on - strand, within MPMX26_00580at 615.689 kb on - strand, within MPMX26_00580at 615.696 kb on - strand, within MPMX26_00580at 615.701 kb on - strand, within MPMX26_00580

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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612,359 - -0.1
612,406 + MPMX26_00577 0.14 -0.1
612,414 - MPMX26_00577 0.15 +0.3
612,596 - MPMX26_00577 0.37 -1.4
612,596 - MPMX26_00577 0.37 +1.7
612,611 - MPMX26_00577 0.39 -0.7
612,627 - MPMX26_00577 0.41 -0.3
612,767 - MPMX26_00577 0.58 -1.8
612,806 - MPMX26_00577 0.63 -0.7
613,296 + +1.6
613,364 + -0.8
613,380 + MPMX26_00578 0.11 +0.7
613,380 + MPMX26_00578 0.11 +1.4
613,380 + MPMX26_00578 0.11 -1.4
613,390 + MPMX26_00578 0.12 +0.3
613,419 + MPMX26_00578 0.14 -0.3
613,575 + MPMX26_00578 0.24 +1.1
613,752 + MPMX26_00578 0.36 -0.3
614,169 + MPMX26_00578 0.64 +1.3
614,215 + MPMX26_00578 0.67 +0.8
614,641 + +1.5
614,649 + +1.1
614,843 - MPMX26_00579 0.16 +0.0
614,884 - MPMX26_00579 0.26 -0.1
614,884 - MPMX26_00579 0.26 +1.7
615,066 - MPMX26_00579 0.68 -0.7
615,066 - MPMX26_00579 0.68 +0.0
615,079 - MPMX26_00579 0.71 +0.5
615,079 - MPMX26_00579 0.71 -0.5
615,134 - MPMX26_00579 0.84 +0.3
615,338 - -0.4
615,340 - -0.4
615,340 - +0.3
615,341 - -0.6
615,341 - +0.7
615,341 - +0.1
615,341 - +0.3
615,341 - +0.4
615,348 - -0.1
615,374 - +0.4
615,395 - MPMX26_00580 0.12 +0.0
615,395 - MPMX26_00580 0.12 +0.3
615,403 - MPMX26_00580 0.13 -0.4
615,411 - MPMX26_00580 0.14 -0.8
615,460 - MPMX26_00580 0.20 +0.9
615,483 - MPMX26_00580 0.22 +0.5
615,484 - MPMX26_00580 0.23 -0.3
615,484 - MPMX26_00580 0.23 -0.1
615,484 - MPMX26_00580 0.23 -0.2
615,484 - MPMX26_00580 0.23 -0.0
615,484 - MPMX26_00580 0.23 +0.0
615,484 - MPMX26_00580 0.23 +0.1
615,492 - MPMX26_00580 0.24 +0.2
615,504 - MPMX26_00580 0.25 +0.6
615,532 - MPMX26_00580 0.28 -0.8
615,566 - MPMX26_00580 0.32 -0.1
615,566 - MPMX26_00580 0.32 +0.7
615,566 - MPMX26_00580 0.32 +0.4
615,566 - MPMX26_00580 0.32 +0.0
615,566 - MPMX26_00580 0.32 +0.5
615,566 - MPMX26_00580 0.32 -0.1
615,588 - MPMX26_00580 0.35 -0.5
615,620 - MPMX26_00580 0.39 -0.4
615,620 - MPMX26_00580 0.39 +0.4
615,626 - MPMX26_00580 0.40 +0.2
615,626 - MPMX26_00580 0.40 +0.1
615,628 - MPMX26_00580 0.40 +0.0
615,628 - MPMX26_00580 0.40 +0.6
615,628 - MPMX26_00580 0.40 -0.0
615,648 - MPMX26_00580 0.42 -0.1
615,653 - MPMX26_00580 0.43 +0.4
615,653 - MPMX26_00580 0.43 -0.3
615,653 - MPMX26_00580 0.43 +0.2
615,653 - MPMX26_00580 0.43 +0.5
615,653 - MPMX26_00580 0.43 -0.3
615,653 - MPMX26_00580 0.43 +0.5
615,653 - MPMX26_00580 0.43 -0.2
615,653 - MPMX26_00580 0.43 +0.4
615,653 - MPMX26_00580 0.43 +0.1
615,653 - MPMX26_00580 0.43 +0.2
615,653 - MPMX26_00580 0.43 +0.9
615,660 - MPMX26_00580 0.44 +0.2
615,689 - MPMX26_00580 0.47 +0.2
615,696 - MPMX26_00580 0.48 +0.1
615,701 - MPMX26_00580 0.49 +0.7

Or see this region's nucleotide sequence