Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00411

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00410 and MPMX26_00411 are separated by 120 nucleotidesMPMX26_00411 and MPMX26_00412 are separated by 340 nucleotidesMPMX26_00412 and MPMX26_00413 are separated by 105 nucleotides MPMX26_00410: MPMX26_00410 - hypothetical protein, at 439,396 to 440,130 _00410 MPMX26_00411: MPMX26_00411 - Fumarate hydratase class I, aerobic, at 440,251 to 441,777 _00411 MPMX26_00412: MPMX26_00412 - hypothetical protein, at 442,118 to 442,207 _00412 MPMX26_00413: MPMX26_00413 - Trans-aconitate 2-methyltransferase, at 442,313 to 442,921 _00413 Position (kb) 440 441 442Strain fitness (log2 ratio) -3 -2 -1 0 1at 439.277 kb on + strandat 439.277 kb on + strandat 440.257 kb on - strandat 440.272 kb on - strandat 440.323 kb on - strandat 440.323 kb on - strandat 440.335 kb on - strandat 440.476 kb on + strand, within MPMX26_00411at 440.480 kb on - strand, within MPMX26_00411at 440.904 kb on + strand, within MPMX26_00411at 440.958 kb on - strand, within MPMX26_00411at 441.018 kb on - strand, within MPMX26_00411at 441.219 kb on - strand, within MPMX26_00411at 441.221 kb on - strand, within MPMX26_00411at 441.231 kb on - strand, within MPMX26_00411at 441.273 kb on - strand, within MPMX26_00411at 441.486 kb on - strand, within MPMX26_00411at 441.602 kb on - strand, within MPMX26_00411at 441.625 kb on - strandat 442.096 kb on + strandat 442.096 kb on + strandat 442.096 kb on + strandat 442.096 kb on + strandat 442.101 kb on + strandat 442.101 kb on + strandat 442.101 kb on + strandat 442.108 kb on + strandat 442.135 kb on + strand, within MPMX26_00412at 442.166 kb on + strand, within MPMX26_00412at 442.177 kb on + strand, within MPMX26_00412at 442.196 kb on + strand, within MPMX26_00412at 442.196 kb on + strand, within MPMX26_00412at 442.196 kb on + strand, within MPMX26_00412at 442.196 kb on + strand, within MPMX26_00412at 442.201 kb on + strandat 442.201 kb on + strandat 442.201 kb on + strandat 442.201 kb on + strandat 442.208 kb on + strandat 442.374 kb on + strand, within MPMX26_00413at 442.375 kb on + strand, within MPMX26_00413at 442.413 kb on + strand, within MPMX26_00413at 442.465 kb on + strand, within MPMX26_00413at 442.465 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.544 kb on + strand, within MPMX26_00413at 442.619 kb on + strand, within MPMX26_00413at 442.643 kb on + strand, within MPMX26_00413at 442.727 kb on + strand, within MPMX26_00413at 442.727 kb on + strand, within MPMX26_00413at 442.727 kb on + strand, within MPMX26_00413at 442.745 kb on + strand, within MPMX26_00413at 442.763 kb on + strand, within MPMX26_00413

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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439,277 + -0.3
439,277 + +0.1
440,257 - +0.4
440,272 - -0.3
440,323 - -2.2
440,323 - -2.8
440,335 - -2.9
440,476 + MPMX26_00411 0.15 -0.6
440,480 - MPMX26_00411 0.15 +0.0
440,904 + MPMX26_00411 0.43 -0.3
440,958 - MPMX26_00411 0.46 -0.8
441,018 - MPMX26_00411 0.50 -0.8
441,219 - MPMX26_00411 0.63 +0.4
441,221 - MPMX26_00411 0.64 -0.3
441,231 - MPMX26_00411 0.64 -0.8
441,273 - MPMX26_00411 0.67 -1.4
441,486 - MPMX26_00411 0.81 -0.8
441,602 - MPMX26_00411 0.88 +0.0
441,625 - +1.0
442,096 + +1.3
442,096 + -0.1
442,096 + -1.4
442,096 + +0.6
442,101 + -1.1
442,101 + +0.6
442,101 + +0.6
442,108 + +0.5
442,135 + MPMX26_00412 0.19 +0.1
442,166 + MPMX26_00412 0.53 +0.8
442,177 + MPMX26_00412 0.66 -0.1
442,196 + MPMX26_00412 0.87 +0.0
442,196 + MPMX26_00412 0.87 +0.4
442,196 + MPMX26_00412 0.87 +0.6
442,196 + MPMX26_00412 0.87 +0.3
442,201 + +0.1
442,201 + +0.0
442,201 + +0.4
442,201 + +0.2
442,208 + +0.3
442,374 + MPMX26_00413 0.10 -0.7
442,375 + MPMX26_00413 0.10 -0.2
442,413 + MPMX26_00413 0.16 +1.4
442,465 + MPMX26_00413 0.25 -0.2
442,465 + MPMX26_00413 0.25 -0.5
442,526 + MPMX26_00413 0.35 +0.3
442,526 + MPMX26_00413 0.35 -1.1
442,526 + MPMX26_00413 0.35 -0.6
442,526 + MPMX26_00413 0.35 +0.4
442,526 + MPMX26_00413 0.35 +0.7
442,526 + MPMX26_00413 0.35 +0.4
442,526 + MPMX26_00413 0.35 +0.3
442,526 + MPMX26_00413 0.35 +0.3
442,526 + MPMX26_00413 0.35 +0.6
442,526 + MPMX26_00413 0.35 -0.1
442,544 + MPMX26_00413 0.38 +1.3
442,619 + MPMX26_00413 0.50 -0.3
442,643 + MPMX26_00413 0.54 -0.2
442,727 + MPMX26_00413 0.68 +0.4
442,727 + MPMX26_00413 0.68 +0.4
442,727 + MPMX26_00413 0.68 -0.4
442,745 + MPMX26_00413 0.71 -0.1
442,763 + MPMX26_00413 0.74 -0.2

Or see this region's nucleotide sequence