Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF945

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
678,201	-		GFF944	0.38	+0.6
678,207	-		GFF944	0.39	+0.8
678,242	+		GFF944	0.41	-0.5
678,347	+		GFF944	0.47	+0.3
678,348	-		GFF944	0.47	-0.7
678,350	+		GFF944	0.48	-0.8
678,351	-		GFF944	0.48	-0.3
678,488	-		GFF944	0.56	+0.3
678,597	-		GFF944	0.63	-0.6
678,617	+		GFF944	0.64	-2.2
678,618	-		GFF944	0.64	-0.8
678,720	-		GFF944	0.71	-0.9
678,998	-		GFF944	0.88	-0.4
678,998	-		GFF944	0.88	-0.2
678,998	-		GFF944	0.88	+0.3
678,998	-		GFF944	0.88	-0.8
679,260	+		GFF945	0.12	+0.1
679,261	-		GFF945	0.12	-0.0
679,653	-				-0.2
679,653	-				-0.2
679,654	-				-0.9
679,687	-				+1.0
679,795	+				+1.2
679,795	+				+0.1
680,007	+		GFF946	0.21	-0.6
680,156	+		GFF946	0.31	-0.2
680,207	+		GFF946	0.34	+0.0
680,236	+		GFF946	0.36	+0.2
680,237	-		GFF946	0.36	-0.3
680,343	-		GFF946	0.44	+0.6
680,343	-		GFF946	0.44	+0.1
680,372	+		GFF946	0.46	-0.6
680,373	-		GFF946	0.46	+0.0
680,413	-		GFF946	0.48	-0.0
680,570	+		GFF946	0.59	-1.2
680,571	-		GFF946	0.59	-0.9
680,571	-		GFF946	0.59	-0.6