Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5371

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
2,371,342	+		GFF5369	0.69	+1.4
2,371,342	+		GFF5369	0.69	+0.3
2,371,342	+		GFF5369	0.69	-1.1
2,371,343	-		GFF5369	0.69	+0.9
2,371,766	-		GFF5370	0.39	+0.0
2,371,894	+		GFF5370	0.66	-0.0
2,372,265	+				-0.6
2,372,265	+				-0.6
2,372,615	-		GFF5371	0.31	+0.6
2,372,716	+		GFF5371	0.40	+0.5
2,372,764	+		GFF5371	0.43	-1.2
2,372,775	+		GFF5371	0.44	-0.3
2,372,776	-		GFF5371	0.44	-0.4
2,372,817	+		GFF5371	0.48	+0.6
2,372,817	+		GFF5371	0.48	-0.4
2,372,817	+		GFF5371	0.48	-0.2
2,372,817	+		GFF5371	0.48	-0.5
2,372,817	+		GFF5371	0.48	-0.1
2,372,817	+		GFF5371	0.48	-0.1
2,372,818	-		GFF5371	0.48	+0.2
2,372,818	-		GFF5371	0.48	-0.4
2,372,818	-		GFF5371	0.48	-0.9
2,372,818	-		GFF5371	0.48	-0.5
2,372,883	+		GFF5371	0.53	-2.3
2,372,883	+		GFF5371	0.53	+0.9
2,372,883	+		GFF5371	0.53	+0.9
2,372,883	+		GFF5371	0.53	+0.0
2,372,883	+		GFF5371	0.53	-0.2
2,372,883	+		GFF5371	0.53	-1.8
2,372,883	+		GFF5371	0.53	+1.0
2,372,883	+		GFF5371	0.53	-0.0
2,372,883	+		GFF5371	0.53	-0.0
2,372,883	+		GFF5371	0.53	-0.2
2,372,884	-		GFF5371	0.53	+0.1
2,372,884	-		GFF5371	0.53	+0.7
2,372,884	-		GFF5371	0.53	-0.6
2,372,884	-		GFF5371	0.53	+0.0
2,372,884	-		GFF5371	0.53	+0.0
2,372,884	-		GFF5371	0.53	-0.3
2,372,884	-		GFF5371	0.53	-0.2
2,372,884	-		GFF5371	0.53	+0.2
2,372,884	-		GFF5371	0.53	+0.4
2,372,884	-		GFF5371	0.53	-0.3
2,372,913	+		GFF5371	0.55	-0.3
2,372,914	-		GFF5371	0.55	+0.1
2,372,914	-		GFF5371	0.55	+0.1
2,372,914	-		GFF5371	0.55	-0.6
2,372,914	-		GFF5371	0.55	+0.7
2,373,049	+		GFF5371	0.66	-0.4
2,373,049	+		GFF5371	0.66	-0.0
2,373,049	+		GFF5371	0.66	+0.2
2,373,050	-		GFF5371	0.66	-0.5
2,373,050	-		GFF5371	0.66	+0.2
2,373,052	+		GFF5371	0.66	-0.2
2,373,156	-		GFF5371	0.75	-0.1
2,373,180	-		GFF5371	0.77	-1.0
2,373,471	+				+0.2
2,373,472	-				+0.7
2,374,186	+				+0.1
2,374,465	+		GFF5373	0.14	+0.6
2,374,465	+		GFF5373	0.14	-0.9