Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5325

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
2,327,606	+		GFF5323	0.86	+0.7
2,327,607	-		GFF5323	0.87	+1.2
2,327,654	+				+0.1
2,327,654	+				+1.0
2,327,654	+				-0.4
2,327,928	+		GFF5324	0.36	-0.1
2,327,929	-		GFF5324	0.36	-0.4
2,327,929	-		GFF5324	0.36	+0.1
2,328,800	-		GFF5325	0.53	+0.1
2,328,821	-		GFF5325	0.56	-0.1
2,328,860	-		GFF5325	0.62	+1.3
2,328,860	-		GFF5325	0.62	-0.0
2,329,022	-		GFF5325	0.84	+0.0
2,329,024	+		GFF5325	0.85	+0.4
2,329,024	+		GFF5325	0.85	-0.6