Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5119

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
2,129,358	-		GFF5118	0.18	+0.3
2,129,402	+		GFF5118	0.22	-0.2
2,129,403	-		GFF5118	0.22	-1.0
2,129,403	-		GFF5118	0.22	+0.2
2,129,487	-		GFF5118	0.30	-0.2
2,129,696	+		GFF5118	0.48	+0.1
2,129,697	-		GFF5118	0.49	+0.5
2,129,699	+		GFF5118	0.49	-0.3
2,129,700	-		GFF5118	0.49	-0.2
2,129,700	-		GFF5118	0.49	-0.9
2,129,700	-		GFF5118	0.49	+1.1
2,129,878	-		GFF5118	0.65	+0.5
2,130,081	-		GFF5118	0.83	+0.8
2,130,081	-		GFF5118	0.83	-0.0
2,130,298	+				-1.2
2,130,385	+		GFF5119	0.11	-0.0
2,130,385	+		GFF5119	0.11	-0.4
2,130,385	+		GFF5119	0.11	+1.2
2,130,385	+		GFF5119	0.11	-0.3
2,130,727	+		GFF5119	0.45	-0.4
2,130,728	-		GFF5119	0.45	-0.3
2,130,883	+		GFF5119	0.61	-0.4
2,131,003	+		GFF5119	0.73	+0.4
2,131,948	-				+1.4
2,131,948	-				+0.8
2,132,033	+				+0.3
2,132,033	+				+1.0