Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4639

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
1,587,396	+		GFF4637	0.44	-0.0
1,587,396	+		GFF4637	0.44	-1.1
1,587,397	-		GFF4637	0.44	+0.2
1,587,456	+		GFF4637	0.57	-1.0
1,587,456	+		GFF4637	0.57	-0.2
1,587,457	-		GFF4637	0.57	+0.5
1,587,457	-		GFF4637	0.57	+0.2
1,588,504	+		GFF4639	0.14	+0.5
1,588,505	-		GFF4639	0.14	+0.4
1,588,505	-		GFF4639	0.14	+1.0
1,588,850	-		GFF4639	0.57	-0.9
1,588,850	-		GFF4639	0.57	-0.1
1,589,080	+		GFF4639	0.86	+1.1
1,589,580	+		GFF4640	0.30	+0.1
1,589,581	-		GFF4640	0.30	+0.0
1,590,027	+		GFF4640	0.65	-0.2