Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4114

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
1,024,917	+		GFF4112	0.86	+1.3
1,025,049	+				+0.4
1,025,049	+				-0.9
1,025,049	+				+0.2
1,025,049	+				+0.2
1,025,049	+				-0.1
1,025,049	+				+0.1
1,025,049	+				-0.2
1,025,049	+				+0.0
1,025,050	-				-0.3
1,025,050	-				+0.2
1,025,868	+				-0.3
1,025,868	+				+0.1
1,025,869	-				-0.8
1,026,940	-		GFF4114	0.52	-0.4
1,026,940	-		GFF4114	0.52	-0.4
1,027,074	+		GFF4114	0.58	+0.2
1,027,075	-		GFF4114	0.58	+0.1
1,028,052	-		GFF4115	0.22	+0.6
1,028,052	-		GFF4115	0.22	-0.3
1,028,312	+		GFF4115	0.78	+0.0
1,028,312	+		GFF4115	0.78	-0.3
1,028,312	+		GFF4115	0.78	-0.5
1,028,806	+		GFF4116	0.80	+0.4
1,028,807	-		GFF4116	0.80	-0.4
1,028,854	+		GFF4116	0.89	+0.6
1,028,918	+				-1.3
1,028,918	+				-0.3
1,028,919	-				-0.2