Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3488

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
367,404	+		GFF3486	0.61	-0.4
367,431	+		GFF3486	0.70	-0.0
367,431	+		GFF3486	0.70	-0.0
367,432	-		GFF3486	0.71	-0.7
367,684	-		GFF3487	0.12	+0.4
367,892	-		GFF3487	0.45	-1.9
368,326	-				-0.4
368,371	-				+1.1
368,489	+		GFF3488	0.50	+0.5
368,633	-				-0.2
368,633	-				-0.0
368,633	-				+0.4
368,774	+		GFF3489	0.11	+0.7
368,825	-		GFF3489	0.26	-0.2
369,091	-				+0.6
369,091	-				+0.1
369,091	-				+0.6
369,091	-				+0.0
369,091	-				+0.3
369,091	-				+0.6
369,269	-				+0.3
369,287	+				-0.4
369,287	+				-0.3
369,288	-				+1.4
369,292	-				-0.4
369,292	-				-0.0
369,292	-				+0.4