Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3281

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
165,114	+		GFF3279	0.83	+0.3
165,115	-		GFF3279	0.83	+0.5
165,144	+		GFF3279	0.87	-0.2
165,429	+		GFF3280	0.29	+0.1
165,454	-		GFF3280	0.41	+1.0
165,498	+		GFF3280	0.62	-0.1
165,564	+				+0.7
165,564	+				-0.5
165,958	+		GFF3281	0.37	+0.1
165,959	-		GFF3281	0.37	+0.2
165,961	+		GFF3281	0.37	-0.0
165,962	-		GFF3281	0.37	+0.1
166,099	+		GFF3281	0.51	+0.0
166,100	-		GFF3281	0.51	+0.8
166,301	-		GFF3281	0.71	+0.8
167,582	+		GFF3282	0.60	+1.1