Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1059

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
799,094	+		GFF1058	0.60	+0.5
799,094	+		GFF1058	0.60	-1.1
799,094	+		GFF1058	0.60	-0.0
799,167	-		GFF1058	0.65	+0.2
799,296	+		GFF1058	0.74	-0.5
799,370	+		GFF1058	0.80	+1.0
799,505	+		GFF1058	0.89	+0.1
799,588	-				+0.3
799,908	-		GFF1059	0.68	+0.0
799,908	-		GFF1059	0.68	+0.0
799,908	-		GFF1059	0.68	-1.3
800,459	+		GFF1060	0.17	+0.2
800,459	+		GFF1060	0.17	+1.1
800,459	+		GFF1060	0.17	-0.5
800,460	-		GFF1060	0.17	-0.1
800,742	-		GFF1060	0.35	-0.1
800,943	+		GFF1060	0.49	+0.4
800,943	+		GFF1060	0.49	+0.6
800,944	-		GFF1060	0.49	-1.2
800,975	+		GFF1060	0.51	+1.1
800,976	-		GFF1060	0.51	-0.1
800,976	-		GFF1060	0.51	+0.3