Strain Fitness in Escherichia fergusonii Becca around EFB2_04539

Experiment: BHIS no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with 14 member community plus Klebsiella pneumoniae
4,762,526	-		EFB2_04538	0.26	+0.2
4,762,575	+		EFB2_04538	0.30	-0.3
4,762,575	+		EFB2_04538	0.30	+0.9
4,762,575	+		EFB2_04538	0.30	+0.5
4,762,575	+		EFB2_04538	0.30	+1.1
4,762,646	-		EFB2_04538	0.35	+0.5
4,762,657	+		EFB2_04538	0.36	-0.3
4,762,657	+		EFB2_04538	0.36	+1.2
4,762,657	+		EFB2_04538	0.36	+0.2
4,762,658	-		EFB2_04538	0.36	+1.0
4,762,670	-		EFB2_04538	0.37	-0.5
4,762,670	-		EFB2_04538	0.37	-0.0
4,762,670	-		EFB2_04538	0.37	-2.1
4,762,687	+		EFB2_04538	0.38	+0.8
4,762,687	+		EFB2_04538	0.38	+1.3
4,762,687	+		EFB2_04538	0.38	+0.5
4,762,688	-		EFB2_04538	0.38	-0.1
4,762,688	-		EFB2_04538	0.38	+1.1
4,762,688	-		EFB2_04538	0.38	-0.7
4,762,688	-		EFB2_04538	0.38	+0.4
4,762,688	-		EFB2_04538	0.38	-0.8
4,762,688	-		EFB2_04538	0.38	+0.6
4,762,691	+		EFB2_04538	0.38	+0.1
4,762,691	+		EFB2_04538	0.38	+0.2
4,762,711	+		EFB2_04538	0.40	-0.3
4,762,711	+		EFB2_04538	0.40	+2.3
4,762,712	-		EFB2_04538	0.40	+1.4
4,762,777	-		EFB2_04538	0.45	+0.0
4,762,819	-		EFB2_04538	0.48	-0.5
4,762,864	+		EFB2_04538	0.51	+0.7
4,762,894	+		EFB2_04538	0.53	-2.0
4,762,894	+		EFB2_04538	0.53	+1.2
4,762,895	-		EFB2_04538	0.53	-0.6
4,762,895	-		EFB2_04538	0.53	+0.3
4,762,899	+		EFB2_04538	0.53	+0.6
4,762,899	+		EFB2_04538	0.53	-0.6
4,762,899	+		EFB2_04538	0.53	+0.9
4,762,900	-		EFB2_04538	0.54	-0.2
4,762,915	-		EFB2_04538	0.55	-0.0
4,762,951	-		EFB2_04538	0.57	-0.2
4,762,956	+		EFB2_04538	0.58	+1.2
4,762,956	+		EFB2_04538	0.58	+0.6
4,762,956	+		EFB2_04538	0.58	+0.1
4,762,957	-		EFB2_04538	0.58	+1.3
4,762,957	-		EFB2_04538	0.58	+0.7
4,762,957	-		EFB2_04538	0.58	-1.0
4,762,957	-		EFB2_04538	0.58	+0.8
4,762,983	+		EFB2_04538	0.60	+0.3
4,762,983	+		EFB2_04538	0.60	-0.2
4,762,998	+		EFB2_04538	0.61	-1.2
4,763,043	+		EFB2_04538	0.64	-1.5
4,763,043	+		EFB2_04538	0.64	+0.6
4,763,043	+		EFB2_04538	0.64	-0.5
4,763,084	+		EFB2_04538	0.67	-0.2
4,763,084	+		EFB2_04538	0.67	+2.2
4,763,084	+		EFB2_04538	0.67	+0.5
4,763,084	+		EFB2_04538	0.67	-1.0
4,763,085	-		EFB2_04538	0.67	-0.2
4,763,088	-		EFB2_04538	0.67	-0.3
4,763,104	+		EFB2_04538	0.69	-0.1
4,763,105	-		EFB2_04538	0.69	-3.0
4,763,189	+		EFB2_04538	0.75	+0.4
4,763,189	+		EFB2_04538	0.75	-0.9
4,763,189	+		EFB2_04538	0.75	+1.2
4,763,190	-		EFB2_04538	0.75	+1.0
4,763,190	-		EFB2_04538	0.75	-0.5
4,763,191	+		EFB2_04538	0.75	-1.7
4,763,209	+		EFB2_04538	0.76	+1.1
4,763,209	+		EFB2_04538	0.76	-3.1
4,763,223	+		EFB2_04538	0.77	+0.6
4,763,262	+		EFB2_04538	0.80	+0.2
4,763,262	+		EFB2_04538	0.80	+0.2
4,763,262	+		EFB2_04538	0.80	+0.8
4,763,262	+		EFB2_04538	0.80	+0.2
4,763,262	+		EFB2_04538	0.80	-2.3
4,763,262	+		EFB2_04538	0.80	+0.4
4,763,262	+		EFB2_04538	0.80	+0.1
4,763,262	+		EFB2_04538	0.80	+0.3
4,763,263	-		EFB2_04538	0.80	-0.0
4,763,263	-		EFB2_04538	0.80	-1.4
4,763,263	-		EFB2_04538	0.80	-0.4
4,763,263	-		EFB2_04538	0.80	-2.1
4,763,263	-		EFB2_04538	0.80	-2.9
4,763,263	-		EFB2_04538	0.80	-0.4
4,763,263	-		EFB2_04538	0.80	-0.4
4,763,263	-		EFB2_04538	0.80	-1.6
4,763,263	-		EFB2_04538	0.80	-1.0
4,763,263	-		EFB2_04538	0.80	+0.6
4,763,263	-		EFB2_04538	0.80	-0.8
4,763,272	+		EFB2_04538	0.81	+0.9
4,763,272	+		EFB2_04538	0.81	+1.2
4,763,305	-		EFB2_04538	0.83	+1.0
4,763,398	+				-0.3
4,763,398	+				+0.9
4,763,398	+				+0.8
4,763,398	+				-2.3
4,763,398	+				-0.2
4,763,398	+				+1.4
4,763,398	+				+0.0
4,763,399	-				-1.1
4,763,399	-				+0.6
4,763,399	-				-0.4
4,763,399	-				-1.4
4,763,399	-				-1.5
4,763,399	-				-3.7
4,763,399	-				+0.4
4,763,399	-				+0.2
4,763,399	-				-0.6
4,763,399	-				-1.5
4,763,399	-				+0.6
4,763,399	-				-1.3
4,763,442	+				+1.2
4,763,445	+				+0.3
4,763,445	+				+0.3
4,763,445	+				-3.5
4,763,446	-				+1.8
4,763,446	-				-1.5
4,763,446	-				-1.7
4,763,446	-				+0.6
4,763,446	-				-1.3
4,763,446	-				+1.2
4,763,466	+				-0.7
4,763,466	+				-3.1
4,763,466	+				-1.4
4,763,466	+				-0.2
4,763,466	+				-0.6
4,763,466	+				+1.3
4,763,466	+				+0.3
4,763,466	+				+2.9
4,763,466	+				+1.4
4,763,466	+				+1.1
4,763,466	+				+0.4
4,763,466	+				-0.1
4,763,466	+				+0.2
4,763,466	+				+0.6
4,763,466	+				+0.2
4,763,466	+				+1.7
4,763,466	+				-0.2
4,763,466	+				+1.7
4,763,467	-				+1.2
4,763,467	-				+0.6
4,763,467	-				+1.1
4,763,467	-				-2.7
4,763,467	-				-1.7
4,763,467	-				+0.2
4,763,468	+				-0.1
4,763,468	+				-0.6
4,763,468	+				-0.7
4,763,468	+				-1.8
4,763,468	+				+0.5
4,763,528	+				+0.7
4,763,528	+				-1.1
4,763,528	+				-1.1
4,763,528	+				+0.9
4,763,528	+				-0.9
4,763,528	+				+2.0
4,763,529	-				+0.5
4,763,529	-				-0.2
4,763,529	-				+0.6
4,763,529	-				+0.1
4,763,529	-				+1.1
4,763,549	+				+0.8
4,763,549	+				+0.6
4,763,549	+				+0.2
4,763,549	+				-0.4
4,763,549	+				+2.6
4,763,549	+				+0.5
4,763,549	+				-2.7
4,763,550	-				-0.0
4,763,550	-				+0.3
4,763,550	-				+1.6
4,763,550	-				+0.1
4,763,550	-				-0.4
4,763,563	+				-1.1
4,763,577	+				-0.2
4,763,577	+				-0.3
4,763,577	+				+0.5
4,763,578	-				-2.2
4,763,578	-				+0.1
4,763,578	-				-0.3
4,763,588	+				-0.5
4,763,588	+				-1.9
4,763,589	-				-0.1
4,763,589	-				-0.2
4,763,589	-				+0.2
4,763,589	-				+0.3
4,763,589	-				-0.1
4,763,618	-				-0.0
4,763,618	-				-0.5
4,763,660	-		EFB2_04539	0.13	-1.3
4,763,660	-		EFB2_04539	0.13	-2.1
4,763,668	-		EFB2_04539	0.14	+0.2
4,763,701	+		EFB2_04539	0.17	-0.0
4,763,701	+		EFB2_04539	0.17	+0.2
4,763,701	+		EFB2_04539	0.17	+0.4
4,763,701	+		EFB2_04539	0.17	+1.3
4,763,701	+		EFB2_04539	0.17	+1.8
4,763,702	-		EFB2_04539	0.17	-0.3
4,763,702	-		EFB2_04539	0.17	+0.3
4,763,702	-		EFB2_04539	0.17	-3.2
4,763,702	-		EFB2_04539	0.17	+0.7
4,763,702	-		EFB2_04539	0.17	-0.2
4,763,702	-		EFB2_04539	0.17	+0.6
4,763,706	-		EFB2_04539	0.17	-2.4
4,763,706	-		EFB2_04539	0.17	+0.8
4,763,706	-		EFB2_04539	0.17	+0.2
4,763,712	+		EFB2_04539	0.18	+0.5
4,763,712	+		EFB2_04539	0.18	+0.7
4,763,712	+		EFB2_04539	0.18	+1.5
4,763,712	+		EFB2_04539	0.18	+0.2
4,763,712	+		EFB2_04539	0.18	-0.5
4,763,713	-		EFB2_04539	0.18	-1.6
4,763,713	-		EFB2_04539	0.18	-0.2
4,763,713	-		EFB2_04539	0.18	-2.2
4,763,713	-		EFB2_04539	0.18	+1.7
4,763,791	+		EFB2_04539	0.25	-0.4
4,763,791	+		EFB2_04539	0.25	+0.9
4,763,791	+		EFB2_04539	0.25	+0.1
4,763,791	+		EFB2_04539	0.25	+0.8
4,763,791	+		EFB2_04539	0.25	-0.8
4,763,791	+		EFB2_04539	0.25	-0.3
4,763,791	+		EFB2_04539	0.25	-1.1
4,763,791	+		EFB2_04539	0.25	+0.3
4,763,792	-		EFB2_04539	0.25	+0.8
4,763,792	-		EFB2_04539	0.25	-0.5
4,763,792	-		EFB2_04539	0.25	+0.9
4,763,792	-		EFB2_04539	0.25	-2.6
4,763,843	+		EFB2_04539	0.30	-0.9
4,763,843	+		EFB2_04539	0.30	-0.9
4,763,843	+		EFB2_04539	0.30	-0.2
4,763,843	+		EFB2_04539	0.30	-2.4
4,763,843	+		EFB2_04539	0.30	-0.4
4,763,843	+		EFB2_04539	0.30	-0.5
4,763,843	+		EFB2_04539	0.30	+0.7
4,763,844	-		EFB2_04539	0.30	+0.1
4,763,844	-		EFB2_04539	0.30	+0.6
4,763,844	-		EFB2_04539	0.30	+0.1
4,763,844	-		EFB2_04539	0.30	+1.5
4,763,844	-		EFB2_04539	0.30	-1.7
4,763,844	-		EFB2_04539	0.30	-2.6
4,763,844	-		EFB2_04539	0.30	-3.1
4,763,890	+		EFB2_04539	0.35	+1.1
4,763,890	+		EFB2_04539	0.35	-0.0
4,763,890	+		EFB2_04539	0.35	+0.8
4,763,890	+		EFB2_04539	0.35	-0.7
4,763,891	-		EFB2_04539	0.35	-0.1
4,763,891	-		EFB2_04539	0.35	-0.1
4,763,891	-		EFB2_04539	0.35	-3.8
4,763,891	-		EFB2_04539	0.35	+0.7
4,763,891	-		EFB2_04539	0.35	-0.0
4,763,891	-		EFB2_04539	0.35	+0.7
4,763,933	+		EFB2_04539	0.39	-0.6
4,763,933	+		EFB2_04539	0.39	-0.5
4,763,934	-		EFB2_04539	0.39	-0.1
4,763,934	-		EFB2_04539	0.39	+0.3
4,764,025	+		EFB2_04539	0.47	-0.6
4,764,025	+		EFB2_04539	0.47	+0.5
4,764,026	-		EFB2_04539	0.47	+2.7
4,764,026	-		EFB2_04539	0.47	+0.5
4,764,029	+		EFB2_04539	0.47	+0.0
4,764,030	-		EFB2_04539	0.48	+0.0
4,764,040	+		EFB2_04539	0.49	+0.5
4,764,041	-		EFB2_04539	0.49	+0.9
4,764,041	-		EFB2_04539	0.49	-0.7
4,764,041	-		EFB2_04539	0.49	-0.0
4,764,041	-		EFB2_04539	0.49	+0.2
4,764,118	+		EFB2_04539	0.56	+0.4
4,764,119	-		EFB2_04539	0.56	+0.8
4,764,173	-		EFB2_04539	0.61	-3.5
4,764,230	-		EFB2_04539	0.66	+0.2
4,764,236	+		EFB2_04539	0.67	+0.1
4,764,237	-		EFB2_04539	0.67	-0.2
4,764,237	-		EFB2_04539	0.67	-0.4
4,764,260	+		EFB2_04539	0.69	+1.3
4,764,260	+		EFB2_04539	0.69	-0.5
4,764,260	+		EFB2_04539	0.69	+0.4
4,764,261	-		EFB2_04539	0.69	+0.0
4,764,261	-		EFB2_04539	0.69	-0.9
4,764,261	-		EFB2_04539	0.69	+0.0
4,764,261	-		EFB2_04539	0.69	-2.3
4,764,261	-		EFB2_04539	0.69	-1.3
4,764,305	+		EFB2_04539	0.73	+0.2
4,764,305	+		EFB2_04539	0.73	-1.3
4,764,306	-		EFB2_04539	0.73	-1.3
4,764,306	-		EFB2_04539	0.73	+1.2
4,764,359	+		EFB2_04539	0.78	+0.0
4,764,359	+		EFB2_04539	0.78	-0.0
4,764,360	-		EFB2_04539	0.78	-0.1
4,764,360	-		EFB2_04539	0.78	+0.3
4,764,360	-		EFB2_04539	0.78	+1.2
4,764,360	-		EFB2_04539	0.78	+0.0
4,764,360	-		EFB2_04539	0.78	-0.6
4,764,364	+		EFB2_04539	0.79	-0.2
4,764,364	+		EFB2_04539	0.79	+0.6
4,764,365	-		EFB2_04539	0.79	-0.1
4,764,377	+		EFB2_04539	0.80	+0.9
4,764,377	+		EFB2_04539	0.80	+1.0
4,764,377	+		EFB2_04539	0.80	+0.0
4,764,404	+		EFB2_04539	0.82	+3.2
4,764,404	+		EFB2_04539	0.82	+0.2
4,764,404	+		EFB2_04539	0.82	-0.0
4,764,404	+		EFB2_04539	0.82	-0.0
4,764,404	+		EFB2_04539	0.82	-0.7
4,764,405	-		EFB2_04539	0.82	-0.7
4,764,405	-		EFB2_04539	0.82	-0.2
4,764,405	-		EFB2_04539	0.82	-2.0
4,764,405	-		EFB2_04539	0.82	-1.3
4,764,405	-		EFB2_04539	0.82	-2.8
4,764,422	-		EFB2_04539	0.84	-0.6
4,764,432	+		EFB2_04539	0.85	+1.8
4,764,432	+		EFB2_04539	0.85	-0.4
4,764,433	-		EFB2_04539	0.85	-1.2
4,764,472	-		EFB2_04539	0.89	+0.5
4,764,490	+				-0.8
4,764,490	+				-0.5
4,764,490	+				-1.4
4,764,490	+				+0.4
4,764,490	+				+0.4
4,764,490	+				+0.1
4,764,490	+				-2.1
4,764,490	+				+0.4
4,764,490	+				-2.2
4,764,490	+				-0.0
4,764,490	+				+0.7
4,764,490	+				-0.6
4,764,490	+				-0.3
4,764,490	+				+1.3
4,764,490	+				-0.3
4,764,490	+				-0.5
4,764,490	+				+0.2
4,764,490	+				-0.3
4,764,490	+				+0.5
4,764,491	-				+0.1
4,764,491	-				+0.5
4,764,491	-				+0.5
4,764,491	-				-0.0
4,764,491	-				-2.1
4,764,491	-				+0.6
4,764,491	-				+1.6
4,764,491	-				+0.3
4,764,491	-				-1.1
4,764,491	-				-2.1
4,764,491	-				-0.3
4,764,491	-				+1.7
4,764,491	-				+0.9
4,764,491	-				+1.7
4,764,491	-				+0.9
4,764,532	+				+0.4
4,764,532	+				-0.4
4,764,533	-				+1.9
4,764,533	-				-0.2
4,764,533	-				+0.0
4,764,533	-				-1.0
4,764,533	-				-2.5
4,764,533	-				+0.2
4,764,554	+				-0.3
4,764,585	-				-1.5
4,764,585	-				-1.4
4,764,585	-				+0.5
4,764,585	-				-0.3
4,764,585	-				+0.2
4,764,585	-				-2.8
4,764,610	+				-0.7
4,764,610	+				-0.6
4,764,610	+				+0.5
4,764,610	+				-2.0
4,764,610	+				-1.7
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