Strain Fitness in Escherichia fergusonii Becca around EFB2_04062

Experiment: BHIS no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with 14 member community plus Klebsiella pneumoniae
4,270,944	+		EFB2_04061	0.39	-1.7
4,270,944	+		EFB2_04061	0.39	+0.8
4,270,945	-		EFB2_04061	0.39	-1.0
4,270,945	-		EFB2_04061	0.39	+0.2
4,270,955	+		EFB2_04061	0.40	+1.2
4,270,955	+		EFB2_04061	0.40	+1.3
4,270,955	+		EFB2_04061	0.40	-2.2
4,270,955	+		EFB2_04061	0.40	-0.2
4,270,955	+		EFB2_04061	0.40	-1.0
4,270,955	+		EFB2_04061	0.40	-1.1
4,270,955	+		EFB2_04061	0.40	-1.6
4,270,955	+		EFB2_04061	0.40	+0.9
4,270,955	+		EFB2_04061	0.40	-1.5
4,270,955	+		EFB2_04061	0.40	-0.0
4,270,955	+		EFB2_04061	0.40	+0.5
4,270,955	+		EFB2_04061	0.40	+0.1
4,270,955	+		EFB2_04061	0.40	+0.3
4,270,956	-		EFB2_04061	0.40	+0.5
4,270,956	-		EFB2_04061	0.40	-0.8
4,270,956	-		EFB2_04061	0.40	+0.5
4,270,956	-		EFB2_04061	0.40	-0.5
4,270,956	-		EFB2_04061	0.40	-0.6
4,270,956	-		EFB2_04061	0.40	+0.6
4,270,956	-		EFB2_04061	0.40	+0.3
4,270,962	+		EFB2_04061	0.40	-0.4
4,270,963	-		EFB2_04061	0.40	-0.4
4,270,963	-		EFB2_04061	0.40	-1.2
4,270,963	-		EFB2_04061	0.40	+0.4
4,270,963	-		EFB2_04061	0.40	+0.0
4,270,963	-		EFB2_04061	0.40	+0.8
4,271,021	+		EFB2_04061	0.45	+1.0
4,271,022	-		EFB2_04061	0.45	+0.8
4,271,022	-		EFB2_04061	0.45	-0.4
4,271,022	-		EFB2_04061	0.45	+0.6
4,271,033	+		EFB2_04061	0.45	+0.9
4,271,033	+		EFB2_04061	0.45	+2.1
4,271,034	-		EFB2_04061	0.45	-1.5
4,271,102	+		EFB2_04061	0.51	-0.1
4,271,102	+		EFB2_04061	0.51	+0.4
4,271,103	-		EFB2_04061	0.51	-0.0
4,271,103	-		EFB2_04061	0.51	+1.1
4,271,125	+		EFB2_04061	0.52	+0.5
4,271,125	+		EFB2_04061	0.52	+1.9
4,271,125	+		EFB2_04061	0.52	+1.5
4,271,125	+		EFB2_04061	0.52	+1.3
4,271,125	+		EFB2_04061	0.52	+1.6
4,271,125	+		EFB2_04061	0.52	-1.1
4,271,126	-		EFB2_04061	0.52	-0.7
4,271,126	-		EFB2_04061	0.52	+0.2
4,271,126	-		EFB2_04061	0.52	-0.1
4,271,126	-		EFB2_04061	0.52	-1.8
4,271,126	-		EFB2_04061	0.52	+0.1
4,271,126	-		EFB2_04061	0.52	-2.1
4,271,126	-		EFB2_04061	0.52	-0.9
4,271,126	-		EFB2_04061	0.52	-0.3
4,271,133	-		EFB2_04061	0.53	-2.3
4,271,133	-		EFB2_04061	0.53	+2.2
4,271,206	+		EFB2_04061	0.58	-1.1
4,271,207	-		EFB2_04061	0.58	+0.5
4,271,256	-		EFB2_04061	0.62	+0.6
4,271,269	+		EFB2_04061	0.63	-1.0
4,271,269	+		EFB2_04061	0.63	+0.4
4,271,270	-		EFB2_04061	0.63	+0.9
4,271,270	-		EFB2_04061	0.63	-1.4
4,271,270	-		EFB2_04061	0.63	-2.4
4,271,302	+		EFB2_04061	0.66	+0.9
4,271,302	+		EFB2_04061	0.66	-3.0
4,271,302	+		EFB2_04061	0.66	-0.1
4,271,302	+		EFB2_04061	0.66	-0.8
4,271,302	+		EFB2_04061	0.66	-3.3
4,271,302	+		EFB2_04061	0.66	+2.0
4,271,302	+		EFB2_04061	0.66	-1.3
4,271,303	-		EFB2_04061	0.66	-1.5
4,271,303	-		EFB2_04061	0.66	-0.1
4,271,303	-		EFB2_04061	0.66	+0.4
4,271,303	-		EFB2_04061	0.66	+1.7
4,271,303	-		EFB2_04061	0.66	+0.4
4,271,303	-		EFB2_04061	0.66	+1.0
4,271,303	-		EFB2_04061	0.66	+0.4
4,271,303	-		EFB2_04061	0.66	-0.7
4,271,303	-		EFB2_04061	0.66	+0.0
4,271,303	-		EFB2_04061	0.66	-0.0
4,271,313	-		EFB2_04061	0.66	-2.0
4,271,316	+		EFB2_04061	0.67	+0.5
4,271,316	+		EFB2_04061	0.67	+1.0
4,271,316	+		EFB2_04061	0.67	-2.1
4,271,316	+		EFB2_04061	0.67	-0.0
4,271,316	+		EFB2_04061	0.67	+0.8
4,271,317	-		EFB2_04061	0.67	-0.8
4,271,317	-		EFB2_04061	0.67	+1.3
4,271,317	-		EFB2_04061	0.67	-1.9
4,271,317	-		EFB2_04061	0.67	-0.3
4,271,317	-		EFB2_04061	0.67	+1.9
4,271,317	-		EFB2_04061	0.67	-0.1
4,271,317	-		EFB2_04061	0.67	+0.1
4,271,317	-		EFB2_04061	0.67	+2.0
4,271,318	-		EFB2_04061	0.67	-1.5
4,271,330	-		EFB2_04061	0.68	-1.2
4,271,360	+		EFB2_04061	0.70	+0.3
4,271,360	+		EFB2_04061	0.70	-1.5
4,271,360	+		EFB2_04061	0.70	-1.0
4,271,360	+		EFB2_04061	0.70	-1.1
4,271,360	+		EFB2_04061	0.70	+1.3
4,271,361	-		EFB2_04061	0.70	-2.2
4,271,361	-		EFB2_04061	0.70	-0.6
4,271,361	-		EFB2_04061	0.70	-0.0
4,271,361	-		EFB2_04061	0.70	+0.2
4,271,361	-		EFB2_04061	0.70	-0.2
4,271,361	-		EFB2_04061	0.70	+0.4
4,271,369	+		EFB2_04061	0.71	-3.5
4,271,369	+		EFB2_04061	0.71	-0.0
4,271,370	-		EFB2_04061	0.71	-0.5
4,271,370	-		EFB2_04061	0.71	-1.3
4,271,443	+		EFB2_04061	0.76	+0.7
4,271,443	+		EFB2_04061	0.76	-0.5
4,271,443	+		EFB2_04061	0.76	+0.1
4,271,443	+		EFB2_04061	0.76	-1.1
4,271,443	+		EFB2_04061	0.76	-2.1
4,271,444	-		EFB2_04061	0.76	-0.1
4,271,444	-		EFB2_04061	0.76	-0.7
4,271,444	-		EFB2_04061	0.76	-0.7
4,271,444	-		EFB2_04061	0.76	+0.2
4,271,444	-		EFB2_04061	0.76	+0.0
4,271,491	-		EFB2_04061	0.80	-0.8
4,271,491	-		EFB2_04061	0.80	-1.5
4,271,538	-		EFB2_04061	0.83	+0.4
4,271,538	-		EFB2_04061	0.83	-0.6
4,271,576	+		EFB2_04061	0.86	+0.2
4,271,576	+		EFB2_04061	0.86	+0.6
4,271,576	+		EFB2_04061	0.86	-0.9
4,271,577	-		EFB2_04061	0.86	+0.3
4,271,577	-		EFB2_04061	0.86	+0.2
4,271,577	-		EFB2_04061	0.86	-0.1
4,271,577	-		EFB2_04061	0.86	-0.4
4,271,577	-		EFB2_04061	0.86	+0.6
4,271,593	+		EFB2_04061	0.87	+0.8
4,271,630	+				-2.0
4,271,737	-				+0.3
4,271,783	+				+0.4
4,271,797	+				+1.0
4,271,798	-				-0.4
4,271,821	-				-0.6
4,271,861	-				+0.1
4,271,861	-				+0.2
4,271,861	-				+0.3
4,271,863	+				-0.3
4,271,927	+				-2.4
4,271,927	+				+1.0
4,271,927	+				+1.6
4,271,927	+				+0.4
4,271,927	+				+0.7
4,271,927	+				-0.4
4,271,927	+				+0.4
4,271,928	-				-3.2
4,272,086	+		EFB2_04062	0.22	-0.2
4,272,086	+		EFB2_04062	0.22	-1.1
4,272,086	+		EFB2_04062	0.22	-0.7
4,272,087	-		EFB2_04062	0.22	-2.3
4,272,087	-		EFB2_04062	0.22	-1.3
4,272,087	-		EFB2_04062	0.22	-2.6
4,272,087	-		EFB2_04062	0.22	-2.6
4,272,087	-		EFB2_04062	0.22	-0.2
4,272,087	-		EFB2_04062	0.22	+1.3
4,272,087	-		EFB2_04062	0.22	-3.0
4,272,090	+		EFB2_04062	0.23	-2.0
4,272,090	+		EFB2_04062	0.23	-2.7
4,272,090	+		EFB2_04062	0.23	-1.1
4,272,090	+		EFB2_04062	0.23	-0.6
4,272,090	+		EFB2_04062	0.23	+1.4
4,272,090	+		EFB2_04062	0.23	+0.8
4,272,091	-		EFB2_04062	0.23	-1.0
4,272,091	-		EFB2_04062	0.23	-0.6
4,272,091	-		EFB2_04062	0.23	-1.5
4,272,091	-		EFB2_04062	0.23	+0.5
4,272,091	-		EFB2_04062	0.23	+0.4
4,272,091	-		EFB2_04062	0.23	-0.2
4,272,125	+		EFB2_04062	0.28	+0.1
4,272,125	+		EFB2_04062	0.28	+0.2
4,272,125	+		EFB2_04062	0.28	-0.1
4,272,125	+		EFB2_04062	0.28	-1.2
4,272,126	-		EFB2_04062	0.28	+0.8
4,272,126	-		EFB2_04062	0.28	-0.5
4,272,164	+		EFB2_04062	0.33	-0.5
4,272,164	+		EFB2_04062	0.33	+0.6
4,272,230	-		EFB2_04062	0.42	+0.0
4,272,283	-		EFB2_04062	0.50	+0.6
4,272,297	+		EFB2_04062	0.52	-0.7
4,272,349	+		EFB2_04062	0.59	-0.6
4,272,349	+		EFB2_04062	0.59	+0.2
4,272,349	+		EFB2_04062	0.59	-2.6
4,272,387	+		EFB2_04062	0.64	+0.4
4,272,428	+		EFB2_04062	0.70	-0.1
4,272,428	+		EFB2_04062	0.70	-0.4
4,272,428	+		EFB2_04062	0.70	+1.3
4,272,428	+		EFB2_04062	0.70	-0.3
4,272,428	+		EFB2_04062	0.70	-1.6
4,272,428	+		EFB2_04062	0.70	-1.0
4,272,428	+		EFB2_04062	0.70	-2.7
4,272,428	+		EFB2_04062	0.70	-2.3
4,272,428	+		EFB2_04062	0.70	-0.6
4,272,428	+		EFB2_04062	0.70	+0.2
4,272,429	-		EFB2_04062	0.70	-0.6
4,272,429	-		EFB2_04062	0.70	+0.4
4,272,429	-		EFB2_04062	0.70	-3.0
4,272,429	-		EFB2_04062	0.70	-3.4
4,272,429	-		EFB2_04062	0.70	-0.3
4,272,429	-		EFB2_04062	0.70	-3.4
4,272,429	-		EFB2_04062	0.70	-0.4
4,272,429	-		EFB2_04062	0.70	+0.2
4,272,429	-		EFB2_04062	0.70	-1.9
4,272,429	-		EFB2_04062	0.70	+0.0
4,272,429	-		EFB2_04062	0.70	+0.4
4,272,488	+		EFB2_04062	0.78	-0.5
4,272,488	+		EFB2_04062	0.78	+0.3
4,272,488	+		EFB2_04062	0.78	+0.5
4,272,488	+		EFB2_04062	0.78	-1.6
4,272,488	+		EFB2_04062	0.78	-0.8
4,272,488	+		EFB2_04062	0.78	-2.6
4,272,488	+		EFB2_04062	0.78	-2.2
4,272,488	+		EFB2_04062	0.78	+0.3
4,272,488	+		EFB2_04062	0.78	+0.3
4,272,488	+		EFB2_04062	0.78	-0.2
4,272,488	+		EFB2_04062	0.78	+1.4
4,272,489	-		EFB2_04062	0.78	-0.6
4,272,489	-		EFB2_04062	0.78	+0.9
4,272,489	-		EFB2_04062	0.78	-1.5
4,272,489	-		EFB2_04062	0.78	-1.1
4,272,489	-		EFB2_04062	0.78	-0.8
4,272,489	-		EFB2_04062	0.78	-1.3
4,272,489	-		EFB2_04062	0.78	+1.3
4,272,489	-		EFB2_04062	0.78	+0.1
4,272,489	-		EFB2_04062	0.78	+0.8
4,272,489	-		EFB2_04062	0.78	+1.8
4,272,489	-		EFB2_04062	0.78	-1.4
4,272,489	-		EFB2_04062	0.78	-1.2
4,272,489	-		EFB2_04062	0.78	-0.4
4,272,489	-		EFB2_04062	0.78	-2.0
4,272,489	-		EFB2_04062	0.78	-2.9
4,272,489	-		EFB2_04062	0.78	+0.7
4,272,489	-		EFB2_04062	0.78	+0.2
4,272,489	-		EFB2_04062	0.78	+1.2
4,272,489	-		EFB2_04062	0.78	+0.2
4,272,489	-		EFB2_04062	0.78	-0.8
4,272,492	+		EFB2_04062	0.79	+1.1
4,272,492	+		EFB2_04062	0.79	-1.1
4,272,492	+		EFB2_04062	0.79	-0.5
4,272,492	+		EFB2_04062	0.79	+0.8
4,272,492	+		EFB2_04062	0.79	-0.1
4,272,493	-		EFB2_04062	0.79	-0.4
4,272,493	-		EFB2_04062	0.79	+1.8
4,272,510	+		EFB2_04062	0.81	+2.2
4,272,511	-		EFB2_04062	0.81	+0.8
4,272,511	-		EFB2_04062	0.81	+1.5
4,272,561	+		EFB2_04062	0.88	+2.0
4,272,561	+		EFB2_04062	0.88	+1.6
4,272,561	+		EFB2_04062	0.88	+0.3
4,272,561	+		EFB2_04062	0.88	-1.5
4,272,561	+		EFB2_04062	0.88	-1.3
4,272,561	+		EFB2_04062	0.88	-0.4
4,272,561	+		EFB2_04062	0.88	-0.7
4,272,561	+		EFB2_04062	0.88	+0.6
4,272,561	+		EFB2_04062	0.88	+1.8
4,272,561	+		EFB2_04062	0.88	-1.1
4,272,561	+		EFB2_04062	0.88	-0.4
4,272,561	+		EFB2_04062	0.88	-2.5
4,272,562	-		EFB2_04062	0.88	+0.6
4,272,562	-		EFB2_04062	0.88	+0.9
4,272,562	-		EFB2_04062	0.88	-3.0
4,272,562	-		EFB2_04062	0.88	+0.6
4,272,562	-		EFB2_04062	0.88	+1.0
4,272,562	-		EFB2_04062	0.88	-0.4
4,272,562	-		EFB2_04062	0.88	-2.7
4,272,562	-		EFB2_04062	0.88	-0.4
4,272,562	-		EFB2_04062	0.88	-1.7
4,272,563	+		EFB2_04062	0.88	-0.3
4,272,563	+		EFB2_04062	0.88	-1.1
4,272,563	+		EFB2_04062	0.88	-1.4
4,272,563	+		EFB2_04062	0.88	+0.2
4,272,563	+		EFB2_04062	0.88	+1.2
4,272,563	+		EFB2_04062	0.88	+0.3
4,272,563	+		EFB2_04062	0.88	-0.5
4,272,563	+		EFB2_04062	0.88	-1.8
4,272,563	+		EFB2_04062	0.88	-1.3
4,272,563	+		EFB2_04062	0.88	-0.4
4,272,563	+		EFB2_04062	0.88	-0.3
4,272,563	+		EFB2_04062	0.88	+0.0
4,272,563	+		EFB2_04062	0.88	-0.4
4,272,563	+		EFB2_04062	0.88	-1.3
4,272,563	+		EFB2_04062	0.88	-1.0
4,272,563	+		EFB2_04062	0.88	+0.3
4,272,563	+		EFB2_04062	0.88	-2.5
4,272,563	+		EFB2_04062	0.88	+0.3
4,272,563	+		EFB2_04062	0.88	+0.0
4,272,564	-		EFB2_04062	0.89	+0.1
4,272,564	-		EFB2_04062	0.89	-1.2
4,272,564	-		EFB2_04062	0.89	-0.1
4,272,564	-		EFB2_04062	0.89	+1.0
4,272,564	-		EFB2_04062	0.89	+1.3
4,272,564	-		EFB2_04062	0.89	-0.5
4,272,564	-		EFB2_04062	0.89	-1.4
4,272,564	-		EFB2_04062	0.89	-0.6
4,272,564	-		EFB2_04062	0.89	+0.4
4,272,564	-		EFB2_04062	0.89	-0.3
4,272,564	-		EFB2_04062	0.89	-0.4
4,272,564	-		EFB2_04062	0.89	+0.5
4,272,564	-		EFB2_04062	0.89	-3.4
4,272,564	-		EFB2_04062	0.89	+0.2
4,272,564	-		EFB2_04062	0.89	-0.7
4,272,564	-		EFB2_04062	0.89	-1.5
4,272,564	-		EFB2_04062	0.89	-1.5
4,272,564	-		EFB2_04062	0.89	-0.7
4,272,598	+				-1.1
4,272,598	+				+0.9
4,272,598	+				-1.8
4,272,598	+				+1.2
4,272,598	+				+0.1
4,272,598	+				-1.1
4,272,599	-				+0.6
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4,273,635	-		EFB2_04063	0.76	-3.0