Strain Fitness in Escherichia fergusonii Becca around EFB2_03737

Experiment: BHIS no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with 14 member community plus Klebsiella pneumoniae
3,913,412	+		EFB2_03736	0.56	-1.4
3,913,412	+		EFB2_03736	0.56	-0.6
3,913,413	-		EFB2_03736	0.56	+0.0
3,913,413	-		EFB2_03736	0.56	-3.1
3,913,413	-		EFB2_03736	0.56	+0.7
3,913,413	-		EFB2_03736	0.56	+0.6
3,913,413	-		EFB2_03736	0.56	-2.8
3,913,413	-		EFB2_03736	0.56	-0.4
3,913,415	+		EFB2_03736	0.56	+1.2
3,913,415	+		EFB2_03736	0.56	+0.1
3,913,415	+		EFB2_03736	0.56	+0.1
3,913,415	+		EFB2_03736	0.56	-2.6
3,913,416	-		EFB2_03736	0.56	+0.3
3,913,416	-		EFB2_03736	0.56	-1.3
3,913,416	-		EFB2_03736	0.56	-0.5
3,913,416	-		EFB2_03736	0.56	-1.3
3,913,416	-		EFB2_03736	0.56	-0.1
3,913,416	-		EFB2_03736	0.56	-2.2
3,913,448	+		EFB2_03736	0.58	+3.0
3,913,448	+		EFB2_03736	0.58	+0.2
3,913,448	+		EFB2_03736	0.58	-0.4
3,913,449	-		EFB2_03736	0.59	-0.9
3,913,449	-		EFB2_03736	0.59	+1.3
3,913,449	-		EFB2_03736	0.59	+1.0
3,913,449	-		EFB2_03736	0.59	+0.2
3,913,468	-		EFB2_03736	0.60	+1.2
3,913,511	+		EFB2_03736	0.63	-0.1
3,913,511	+		EFB2_03736	0.63	-0.4
3,913,511	+		EFB2_03736	0.63	-2.3
3,913,511	+		EFB2_03736	0.63	+0.1
3,913,511	+		EFB2_03736	0.63	-0.0
3,913,511	+		EFB2_03736	0.63	+0.1
3,913,511	+		EFB2_03736	0.63	+0.3
3,913,511	+		EFB2_03736	0.63	-2.8
3,913,511	+		EFB2_03736	0.63	-0.2
3,913,512	-		EFB2_03736	0.63	-1.2
3,913,512	-		EFB2_03736	0.63	+0.9
3,913,512	-		EFB2_03736	0.63	-0.3
3,913,512	-		EFB2_03736	0.63	+0.3
3,913,512	-		EFB2_03736	0.63	-1.0
3,913,512	-		EFB2_03736	0.63	-0.9
3,913,512	-		EFB2_03736	0.63	+1.2
3,913,512	-		EFB2_03736	0.63	-0.3
3,913,512	-		EFB2_03736	0.63	-0.2
3,913,512	-		EFB2_03736	0.63	+0.7
3,913,512	-		EFB2_03736	0.63	-1.5
3,913,512	-		EFB2_03736	0.63	-1.2
3,913,515	+		EFB2_03736	0.63	+1.6
3,913,515	+		EFB2_03736	0.63	-0.6
3,913,515	+		EFB2_03736	0.63	+1.5
3,913,515	+		EFB2_03736	0.63	+0.5
3,913,515	+		EFB2_03736	0.63	+0.2
3,913,515	+		EFB2_03736	0.63	+1.3
3,913,515	+		EFB2_03736	0.63	-0.5
3,913,515	+		EFB2_03736	0.63	-0.2
3,913,515	+		EFB2_03736	0.63	-3.0
3,913,516	-		EFB2_03736	0.64	+0.3
3,913,516	-		EFB2_03736	0.64	-2.3
3,913,516	-		EFB2_03736	0.64	-0.6
3,913,530	+		EFB2_03736	0.65	-1.7
3,913,530	+		EFB2_03736	0.65	+1.6
3,913,531	-		EFB2_03736	0.65	-0.7
3,913,531	-		EFB2_03736	0.65	+0.4
3,913,569	+		EFB2_03736	0.68	+1.5
3,913,569	+		EFB2_03736	0.68	+0.3
3,913,570	-		EFB2_03736	0.68	+0.0
3,913,573	+		EFB2_03736	0.68	+0.4
3,913,573	+		EFB2_03736	0.68	+0.8
3,913,574	-		EFB2_03736	0.68	+0.3
3,913,591	+		EFB2_03736	0.69	+0.5
3,913,632	+		EFB2_03736	0.72	-0.9
3,913,632	+		EFB2_03736	0.72	-0.4
3,913,632	+		EFB2_03736	0.72	-1.2
3,913,632	+		EFB2_03736	0.72	+0.6
3,913,632	+		EFB2_03736	0.72	+0.7
3,913,632	+		EFB2_03736	0.72	-0.2
3,913,632	+		EFB2_03736	0.72	+0.4
3,913,632	+		EFB2_03736	0.72	+0.5
3,913,632	+		EFB2_03736	0.72	+0.1
3,913,632	+		EFB2_03736	0.72	+1.2
3,913,632	+		EFB2_03736	0.72	-0.5
3,913,632	+		EFB2_03736	0.72	+0.5
3,913,632	+		EFB2_03736	0.72	+3.0
3,913,632	+		EFB2_03736	0.72	+0.3
3,913,633	-		EFB2_03736	0.72	+0.8
3,913,633	-		EFB2_03736	0.72	-2.1
3,913,633	-		EFB2_03736	0.72	+0.3
3,913,633	-		EFB2_03736	0.72	-0.5
3,913,633	-		EFB2_03736	0.72	-1.3
3,913,633	-		EFB2_03736	0.72	+1.6
3,913,633	-		EFB2_03736	0.72	+0.7
3,913,633	-		EFB2_03736	0.72	+0.2
3,913,633	-		EFB2_03736	0.72	-0.5
3,913,633	-		EFB2_03736	0.72	-0.6
3,913,633	-		EFB2_03736	0.72	+0.4
3,913,633	-		EFB2_03736	0.72	-0.9
3,913,633	-		EFB2_03736	0.72	-1.4
3,913,635	+		EFB2_03736	0.73	-1.9
3,913,635	+		EFB2_03736	0.73	+1.6
3,913,635	+		EFB2_03736	0.73	-0.1
3,913,635	+		EFB2_03736	0.73	-0.1
3,913,636	-		EFB2_03736	0.73	-3.4
3,913,636	-		EFB2_03736	0.73	-0.5
3,913,636	-		EFB2_03736	0.73	-0.5
3,913,636	-		EFB2_03736	0.73	+0.8
3,913,668	-		EFB2_03736	0.75	+0.9
3,913,698	+		EFB2_03736	0.77	-0.9
3,913,698	+		EFB2_03736	0.77	-1.1
3,913,698	+		EFB2_03736	0.77	-1.6
3,913,698	+		EFB2_03736	0.77	-0.5
3,913,698	+		EFB2_03736	0.77	-0.2
3,913,699	-		EFB2_03736	0.77	+1.1
3,913,734	+		EFB2_03736	0.80	+1.2
3,913,734	+		EFB2_03736	0.80	-2.0
3,913,735	-		EFB2_03736	0.80	-1.7
3,913,757	+		EFB2_03736	0.82	-1.4
3,913,757	+		EFB2_03736	0.82	-1.4
3,913,758	-		EFB2_03736	0.82	+0.6
3,913,758	-		EFB2_03736	0.82	-2.3
3,913,803	-		EFB2_03736	0.85	+0.2
3,913,805	+		EFB2_03736	0.85	+0.2
3,913,836	+		EFB2_03736	0.88	-0.3
3,913,836	+		EFB2_03736	0.88	+1.2
3,913,836	+		EFB2_03736	0.88	+0.3
3,913,836	+		EFB2_03736	0.88	-1.3
3,913,836	+		EFB2_03736	0.88	-0.4
3,913,836	+		EFB2_03736	0.88	+1.6
3,913,836	+		EFB2_03736	0.88	-1.0
3,913,837	-		EFB2_03736	0.88	-0.3
3,913,837	-		EFB2_03736	0.88	-0.5
3,913,837	-		EFB2_03736	0.88	+0.8
3,913,837	-		EFB2_03736	0.88	-0.2
3,913,837	-		EFB2_03736	0.88	-1.1
3,913,837	-		EFB2_03736	0.88	-0.8
3,913,838	+		EFB2_03736	0.88	-0.1
3,913,839	-		EFB2_03736	0.88	-0.5
3,913,839	-		EFB2_03736	0.88	+1.6
3,913,842	-		EFB2_03736	0.88	+0.9
3,913,856	+		EFB2_03736	0.89	-1.4
3,913,856	+		EFB2_03736	0.89	-0.0
3,913,856	+		EFB2_03736	0.89	+0.5
3,913,857	-		EFB2_03736	0.89	-0.2
3,913,857	-		EFB2_03736	0.89	-0.1
3,913,857	-		EFB2_03736	0.89	+0.8
3,913,857	-		EFB2_03736	0.89	-0.8
3,913,884	+				+1.0
3,913,884	+				-0.2
3,913,884	+				+2.5
3,913,885	-				-0.2
3,913,885	-				+0.9
3,913,885	-				-0.2
3,913,885	-				+0.8
3,913,919	-				+0.9
3,913,919	-				-1.5
3,913,920	+				+0.0
3,913,920	+				-1.2
3,913,920	+				-0.9
3,913,920	+				-1.5
3,913,921	-				-3.1
3,913,925	+				+1.1
3,913,925	+				-2.3
3,913,925	+				-0.7
3,913,926	-				-0.5
3,913,926	-				+0.0
3,913,926	-				-0.3
3,913,926	-				+1.4
3,913,926	-				-0.6
3,913,940	+				+0.5
3,914,183	+				+0.1
3,914,196	+				+1.3
3,914,341	+				-1.0
3,914,341	+				+1.4
3,914,341	+				+0.9
3,914,365	-				-0.1
3,914,377	+				+0.1
3,914,436	-		EFB2_03737	0.14	-0.6
3,914,453	-		EFB2_03737	0.16	-0.6
3,914,541	+		EFB2_03737	0.31	+0.3
3,914,541	+		EFB2_03737	0.31	-2.5
3,914,541	+		EFB2_03737	0.31	+1.3
3,914,542	-		EFB2_03737	0.31	-0.2
3,914,542	-		EFB2_03737	0.31	-0.7
3,914,542	-		EFB2_03737	0.31	+1.0
3,914,542	-		EFB2_03737	0.31	-0.5
3,914,542	-		EFB2_03737	0.31	+2.5
3,914,543	+		EFB2_03737	0.32	+0.6
3,914,544	-		EFB2_03737	0.32	+0.8
3,914,606	+		EFB2_03737	0.42	-0.3
3,914,609	+		EFB2_03737	0.43	-2.2
3,914,609	+		EFB2_03737	0.43	+0.2
3,914,609	+		EFB2_03737	0.43	-1.2
3,914,609	+		EFB2_03737	0.43	-3.5
3,914,609	+		EFB2_03737	0.43	+0.5
3,914,609	+		EFB2_03737	0.43	-1.9
3,914,609	+		EFB2_03737	0.43	+0.9
3,914,609	+		EFB2_03737	0.43	+2.3
3,914,609	+		EFB2_03737	0.43	-0.4
3,914,610	-		EFB2_03737	0.43	-3.3
3,914,610	-		EFB2_03737	0.43	+0.5
3,914,610	-		EFB2_03737	0.43	+2.5
3,914,610	-		EFB2_03737	0.43	+0.4
3,914,610	-		EFB2_03737	0.43	+0.6
3,914,610	-		EFB2_03737	0.43	-1.4
3,914,610	-		EFB2_03737	0.43	+0.5
3,914,610	-		EFB2_03737	0.43	+0.4
3,914,610	-		EFB2_03737	0.43	+2.0
3,914,610	-		EFB2_03737	0.43	+0.3
3,914,610	-		EFB2_03737	0.43	-0.2
3,914,610	-		EFB2_03737	0.43	+0.6
3,914,651	+		EFB2_03737	0.50	+2.0
3,914,652	-		EFB2_03737	0.50	+0.4
3,914,652	-		EFB2_03737	0.50	-1.8
3,914,692	+		EFB2_03737	0.57	+1.1
3,914,698	+		EFB2_03737	0.58	-0.7
3,914,699	-		EFB2_03737	0.58	+0.2
3,914,720	+		EFB2_03737	0.61	-3.1
3,914,720	+		EFB2_03737	0.61	+1.8
3,914,749	+		EFB2_03737	0.66	-1.5
3,914,808	+		EFB2_03737	0.76	+2.1
3,914,808	+		EFB2_03737	0.76	-0.6
3,914,808	+		EFB2_03737	0.76	+0.7
3,914,813	-		EFB2_03737	0.77	+3.0
3,914,843	+		EFB2_03737	0.82	+1.5
3,914,843	+		EFB2_03737	0.82	+0.0
3,914,843	+		EFB2_03737	0.82	+0.7
3,914,844	-		EFB2_03737	0.82	+1.1
3,914,844	-		EFB2_03737	0.82	-3.2
3,914,872	+		EFB2_03737	0.87	-0.9
3,914,872	+		EFB2_03737	0.87	-1.2
3,914,873	-		EFB2_03737	0.87	-0.7
3,914,873	-		EFB2_03737	0.87	+0.2
3,914,901	-				+2.1
3,914,943	+				-2.6
3,915,033	+				-1.0
3,915,034	-				-0.3
3,915,034	-				-0.8
3,915,053	+				+1.3
3,915,065	-				-0.5
3,915,156	-				-0.6
3,915,309	-		EFB2_03738	0.23	-1.1
3,915,359	+		EFB2_03738	0.29	-4.2
3,915,360	-		EFB2_03738	0.29	-2.2
3,915,360	-		EFB2_03738	0.29	-2.1
3,915,389	+		EFB2_03738	0.32	-1.5
3,915,389	+		EFB2_03738	0.32	-0.9
3,915,390	-		EFB2_03738	0.32	-1.1
3,915,390	-		EFB2_03738	0.32	-0.2
3,915,390	-		EFB2_03738	0.32	+1.9
3,915,434	+		EFB2_03738	0.37	-0.1
3,915,435	-		EFB2_03738	0.38	-0.6
3,915,435	-		EFB2_03738	0.38	-1.9
3,915,435	-		EFB2_03738	0.38	+1.1
3,915,435	-		EFB2_03738	0.38	-0.4
3,915,436	+		EFB2_03738	0.38	-1.1
3,915,437	-		EFB2_03738	0.38	-2.0
3,915,437	-		EFB2_03738	0.38	-0.0
3,915,439	+		EFB2_03738	0.38	-2.5
3,915,439	+		EFB2_03738	0.38	-0.9
3,915,439	+		EFB2_03738	0.38	+0.1
3,915,439	+		EFB2_03738	0.38	+0.7
3,915,439	+		EFB2_03738	0.38	-1.1
3,915,439	+		EFB2_03738	0.38	-0.9
3,915,439	+		EFB2_03738	0.38	+0.4
3,915,439	+		EFB2_03738	0.38	+1.1
3,915,440	-		EFB2_03738	0.38	+1.4
3,915,440	-		EFB2_03738	0.38	+0.6
3,915,440	-		EFB2_03738	0.38	+0.3
3,915,440	-		EFB2_03738	0.38	-0.3
3,915,440	-		EFB2_03738	0.38	+0.2
3,915,440	-		EFB2_03738	0.38	+0.4
3,915,440	-		EFB2_03738	0.38	-0.9
3,915,440	-		EFB2_03738	0.38	-1.3
3,915,440	-		EFB2_03738	0.38	-1.5
3,915,440	-		EFB2_03738	0.38	-0.2
3,915,440	-		EFB2_03738	0.38	-2.4
3,915,440	-		EFB2_03738	0.38	-0.5
3,915,440	-		EFB2_03738	0.38	-1.7
3,915,475	+		EFB2_03738	0.42	-1.9
3,915,475	+		EFB2_03738	0.42	-0.1
3,915,475	+		EFB2_03738	0.42	-0.7
3,915,475	+		EFB2_03738	0.42	+0.3
3,915,476	-		EFB2_03738	0.42	+0.8
3,915,476	-		EFB2_03738	0.42	-0.9
3,915,517	-		EFB2_03738	0.47	+0.1
3,915,550	+		EFB2_03738	0.51	-0.6
3,915,577	-		EFB2_03738	0.54	-0.0
3,915,592	+		EFB2_03738	0.56	-0.3
3,915,592	+		EFB2_03738	0.56	+0.7
3,915,592	+		EFB2_03738	0.56	+0.2
3,915,593	-		EFB2_03738	0.56	+0.3
3,915,620	+		EFB2_03738	0.59	-0.8
3,915,625	+		EFB2_03738	0.59	+1.6
3,915,648	+		EFB2_03738	0.62	-1.5
3,915,648	+		EFB2_03738	0.62	-1.5
3,915,648	+		EFB2_03738	0.62	+1.6
3,915,649	-		EFB2_03738	0.62	-0.1
3,915,649	-		EFB2_03738	0.62	+0.7
3,915,664	+		EFB2_03738	0.64	-0.4
3,915,664	+		EFB2_03738	0.64	-2.8
3,915,665	-		EFB2_03738	0.64	-0.3
3,915,665	-		EFB2_03738	0.64	-1.1
3,915,669	+		EFB2_03738	0.64	+0.3
3,915,669	+		EFB2_03738	0.64	+1.3
3,915,685	-		EFB2_03738	0.66	+0.8
3,915,698	+		EFB2_03738	0.68	-2.4
3,915,698	+		EFB2_03738	0.68	-2.4
3,915,698	+		EFB2_03738	0.68	+1.3
3,915,699	-		EFB2_03738	0.68	-0.1
3,915,728	+		EFB2_03738	0.71	-0.7
3,915,746	+		EFB2_03738	0.73	+1.6
3,915,753	+		EFB2_03738	0.74	+1.7
3,915,755	+		EFB2_03738	0.74	+1.9
3,915,755	+		EFB2_03738	0.74	-1.4
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3,915,906	-				+0.8