Strain Fitness in Escherichia fergusonii Becca around EFB2_02710

Experiment: BHIS no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with 14 member community plus Klebsiella pneumoniae
2,867,950	+		EFB2_02708	0.68	-0.6
2,867,969	-		EFB2_02708	0.71	+1.5
2,868,086	+		EFB2_02708	0.87	-1.0
2,868,086	+		EFB2_02708	0.87	-1.7
2,868,086	+		EFB2_02708	0.87	+1.7
2,868,086	+		EFB2_02708	0.87	-0.5
2,868,087	-		EFB2_02708	0.87	-1.4
2,868,087	-		EFB2_02708	0.87	-0.6
2,868,087	-		EFB2_02708	0.87	+0.5
2,868,087	-		EFB2_02708	0.87	+3.3
2,868,087	-		EFB2_02708	0.87	+0.0
2,868,087	-		EFB2_02708	0.87	+0.5
2,868,087	-		EFB2_02708	0.87	+0.4
2,868,087	-		EFB2_02708	0.87	+0.1
2,868,087	-		EFB2_02708	0.87	+1.2
2,868,122	-				+0.8
2,868,152	+				+0.0
2,868,160	+				-1.5
2,868,160	+				+1.9
2,868,160	+				-1.0
2,868,160	+				+0.4
2,868,161	-				-0.1
2,868,161	-				+1.3
2,868,161	-				+0.2
2,868,161	-				-1.0
2,868,161	-				+1.6
2,868,161	-				+0.9
2,868,178	+				+1.4
2,868,178	+				-0.6
2,868,178	+				-1.7
2,868,178	+				+0.6
2,868,178	+				+1.1
2,868,178	+				+1.5
2,868,178	+				-2.0
2,868,178	+				+3.9
2,868,178	+				+1.8
2,868,178	+				-2.0
2,868,179	-				-2.9
2,868,179	-				-0.9
2,868,179	-				-0.1
2,868,179	-				-0.3
2,868,179	-				-0.6
2,868,179	-				-0.2
2,868,179	-				+0.3
2,868,179	-				+0.5
2,868,179	-				-0.9
2,868,251	+				+2.0
2,868,251	+				-0.5
2,868,251	+				+1.1
2,868,252	-				-0.6
2,868,252	-				-1.8
2,868,252	-				-0.5
2,868,252	-				-0.1
2,868,252	-				-3.2
2,868,252	-				+0.4
2,868,252	-				+0.7
2,868,252	-				+1.2
2,868,252	-				+0.0
2,868,252	-				-0.4
2,868,252	-				-1.7
2,868,292	+				+1.4
2,868,292	+				+1.2
2,868,292	+				+0.5
2,868,292	+				-1.5
2,868,293	-				+0.3
2,868,293	-				-0.3
2,868,293	-				+1.3
2,868,293	-				-1.3
2,868,293	-				-0.6
2,868,298	+				-1.4
2,868,299	-				+2.6
2,868,299	-				+4.7
2,868,299	-				-0.3
2,868,299	-				+0.7
2,868,299	-				-1.4
2,868,302	+				-1.7
2,868,302	+				+0.4
2,868,302	+				+0.8
2,868,302	+				+1.0
2,868,302	+				+1.3
2,868,302	+				+0.0
2,868,302	+				+2.7
2,868,302	+				+0.3
2,868,302	+				-0.8
2,868,302	+				-1.3
2,868,303	-				-0.5
2,868,303	-				-1.8
2,868,303	-				-1.1
2,868,303	-				+1.2
2,868,303	-				-1.8
2,868,303	-				+0.3
2,868,303	-				+1.1
2,868,303	-				+0.8
2,868,303	-				+0.0
2,868,303	-				-0.7
2,868,303	-				-2.8
2,868,303	-				+0.9
2,868,335	+				+0.1
2,868,335	+				+1.4
2,868,335	+				-2.8
2,868,335	+				-1.7
2,868,335	+				-2.5
2,868,336	-				+0.5
2,868,336	-				-3.3
2,868,336	-				+1.8
2,868,336	-				-0.6
2,868,336	-				-1.3
2,868,336	-				-1.1
2,868,336	-				-3.2
2,868,336	-				+1.2
2,868,355	+		EFB2_02709	0.17	-0.5
2,868,355	+		EFB2_02709	0.17	+0.7
2,868,355	+		EFB2_02709	0.17	-0.5
2,868,355	+		EFB2_02709	0.17	+0.7
2,868,356	-		EFB2_02709	0.18	-0.3
2,868,356	-		EFB2_02709	0.18	-1.1
2,868,356	-		EFB2_02709	0.18	-3.5
2,868,356	-		EFB2_02709	0.18	-1.1
2,868,356	-		EFB2_02709	0.18	-0.3
2,868,356	-		EFB2_02709	0.18	+0.3
2,868,356	-		EFB2_02709	0.18	-0.9
2,868,386	+		EFB2_02709	0.31	-1.6
2,868,431	+		EFB2_02709	0.50	-0.6
2,868,432	-		EFB2_02709	0.51	-0.2
2,868,432	-		EFB2_02709	0.51	+0.0
2,868,437	+		EFB2_02709	0.53	+0.0
2,868,437	+		EFB2_02709	0.53	-0.3
2,868,438	-		EFB2_02709	0.53	+2.2
2,868,438	-		EFB2_02709	0.53	-1.5
2,868,438	-		EFB2_02709	0.53	+0.4
2,868,438	-		EFB2_02709	0.53	-0.7
2,868,438	-		EFB2_02709	0.53	-2.2
2,868,440	-		EFB2_02709	0.54	+2.0
2,868,440	-		EFB2_02709	0.54	+0.6
2,868,440	-		EFB2_02709	0.54	+0.1
2,868,470	+		EFB2_02709	0.67	-1.9
2,868,471	-		EFB2_02709	0.68	-1.0
2,868,472	+		EFB2_02709	0.68	-1.1
2,868,472	+		EFB2_02709	0.68	+3.7
2,868,472	+		EFB2_02709	0.68	-3.0
2,868,472	+		EFB2_02709	0.68	-0.3
2,868,472	+		EFB2_02709	0.68	-0.8
2,868,472	+		EFB2_02709	0.68	-0.5
2,868,472	+		EFB2_02709	0.68	+2.3
2,868,472	+		EFB2_02709	0.68	-1.8
2,868,472	+		EFB2_02709	0.68	-3.0
2,868,472	+		EFB2_02709	0.68	-0.8
2,868,472	+		EFB2_02709	0.68	+1.7
2,868,473	-		EFB2_02709	0.68	-0.7
2,868,473	-		EFB2_02709	0.68	-2.6
2,868,473	-		EFB2_02709	0.68	-2.8
2,868,473	-		EFB2_02709	0.68	-0.0
2,868,473	-		EFB2_02709	0.68	+1.3
2,868,473	-		EFB2_02709	0.68	+1.2
2,868,473	-		EFB2_02709	0.68	-1.0
2,868,473	-		EFB2_02709	0.68	+0.2
2,868,473	-		EFB2_02709	0.68	+1.1
2,868,473	-		EFB2_02709	0.68	+0.6
2,868,473	-		EFB2_02709	0.68	-2.8
2,868,473	-		EFB2_02709	0.68	+1.8
2,868,473	-		EFB2_02709	0.68	+1.1
2,868,473	-		EFB2_02709	0.68	-0.9
2,868,473	-		EFB2_02709	0.68	+0.7
2,868,473	-		EFB2_02709	0.68	-0.6
2,868,476	+		EFB2_02709	0.70	-1.1
2,868,508	-		EFB2_02709	0.84	-0.3
2,868,536	+				+1.3
2,868,536	+				-1.0
2,868,536	+				+1.8
2,868,537	-				+0.8
2,868,537	-				-1.4
2,868,538	+				-0.0
2,868,539	-				-1.9
2,868,539	-				-1.6
2,868,560	-				-3.0
2,868,560	-				-2.1
2,868,560	-				-2.5
2,868,574	+				-0.8
2,868,574	+				+1.3
2,868,574	+				+0.7
2,868,574	+				+0.7
2,868,574	+				+0.7
2,868,574	+				+0.7
2,868,574	+				-3.4
2,868,574	+				+0.2
2,868,574	+				-1.8
2,868,575	-				+1.3
2,868,575	-				-0.5
2,868,575	-				+1.4
2,868,575	-				-2.5
2,868,575	-				+0.6
2,868,575	-				+2.2
2,868,575	-				+1.4
2,868,575	-				-1.6
2,868,590	+				+0.9
2,868,591	-				+1.4
2,868,591	-				-0.5
2,868,591	-				+0.8
2,868,591	-				+1.8
2,868,591	-				-1.2
2,868,591	-				+4.5
2,868,591	-				-0.3
2,868,591	-				-2.5
2,868,594	+				+0.7
2,868,594	+				-3.0
2,868,594	+				-2.0
2,868,594	+				+2.3
2,868,594	+				-1.4
2,868,594	+				+1.4
2,868,594	+				+1.3
2,868,594	+				+0.2
2,868,594	+				-0.7
2,868,595	-				-0.7
2,868,595	-				-2.3
2,868,595	-				-2.2
2,868,595	-				+1.9
2,868,595	-				+1.3
2,868,595	-				-0.3
2,868,595	-				-2.8
2,868,595	-				-1.1
2,868,595	-				+2.3
2,868,595	-				+1.9
2,868,595	-				-0.6
2,868,595	-				-1.1
2,868,595	-				-0.3
2,868,625	+				-3.2
2,868,626	-				+0.5
2,868,626	-				+1.5
2,868,626	-				+1.5
2,868,626	-				+0.9
2,868,626	-				+1.0
2,868,636	+				+0.6
2,868,636	+				+0.7
2,868,636	+				-2.7
2,868,637	-				+0.5
2,868,637	-				-0.7
2,868,646	+				-3.9
2,868,646	+				-0.5
2,868,647	-				-0.8
2,868,668	+				+2.2
2,868,671	+				-1.4
2,868,671	+				+0.0
2,868,672	-				+1.4
2,868,675	+				+0.3
2,868,696	-				-2.0
2,868,756	+				+1.1
2,868,770	-				+1.0
2,868,808	-				-1.6
2,868,813	+				+0.0
2,868,813	+				+3.9
2,868,814	-				+2.0
2,868,814	-				+1.3
2,868,814	-				-1.6
2,868,814	-				+3.7
2,868,814	-				+2.1
2,868,814	-				-1.0
2,868,814	-				-1.6
2,868,814	-				-0.0
2,868,865	+				+1.2
2,868,865	+				+0.9
2,868,866	-				+0.4
2,868,888	+				-0.3
2,868,888	+				-0.2
2,868,889	-				-1.5
2,868,889	-				+0.6
2,868,889	-				+0.4
2,868,921	+				-0.3
2,868,961	+		EFB2_02710	0.13	-0.1
2,868,962	-		EFB2_02710	0.13	+0.3
2,868,962	-		EFB2_02710	0.13	-1.6
2,868,966	+		EFB2_02710	0.14	+0.9
2,868,967	-		EFB2_02710	0.14	-0.5
2,868,967	-		EFB2_02710	0.14	+4.4
2,868,967	-		EFB2_02710	0.14	+1.3
2,868,967	-		EFB2_02710	0.14	+0.6
2,868,971	-		EFB2_02710	0.14	+0.0
2,868,979	+		EFB2_02710	0.15	+0.3
2,868,980	-		EFB2_02710	0.15	+2.5
2,869,002	+		EFB2_02710	0.17	+1.2
2,869,002	+		EFB2_02710	0.17	+1.2
2,869,002	+		EFB2_02710	0.17	+1.1
2,869,002	+		EFB2_02710	0.17	+0.1
2,869,002	+		EFB2_02710	0.17	-0.6
2,869,002	+		EFB2_02710	0.17	-0.5
2,869,003	-		EFB2_02710	0.17	+1.3
2,869,005	+		EFB2_02710	0.17	-0.0
2,869,006	-		EFB2_02710	0.17	-2.3
2,869,029	-		EFB2_02710	0.19	-0.3
2,869,039	+		EFB2_02710	0.20	-2.3
2,869,045	+		EFB2_02710	0.21	+0.4
2,869,046	-		EFB2_02710	0.21	-1.5
2,869,046	-		EFB2_02710	0.21	-0.9
2,869,120	-		EFB2_02710	0.28	+0.2
2,869,130	-		EFB2_02710	0.29	-1.3
2,869,130	-		EFB2_02710	0.29	+0.6
2,869,136	+		EFB2_02710	0.29	+1.0
2,869,136	+		EFB2_02710	0.29	-1.0
2,869,147	+		EFB2_02710	0.30	-1.4
2,869,147	+		EFB2_02710	0.30	+1.1
2,869,147	+		EFB2_02710	0.30	-0.0
2,869,147	+		EFB2_02710	0.30	-1.9
2,869,147	+		EFB2_02710	0.30	-1.7
2,869,147	+		EFB2_02710	0.30	-2.8
2,869,148	-		EFB2_02710	0.30	-3.5
2,869,156	+		EFB2_02710	0.31	+0.8
2,869,156	+		EFB2_02710	0.31	-0.2
2,869,182	+		EFB2_02710	0.33	-0.7
2,869,198	+		EFB2_02710	0.35	-1.5
2,869,198	+		EFB2_02710	0.35	+1.3
2,869,198	+		EFB2_02710	0.35	+1.2
2,869,198	+		EFB2_02710	0.35	-0.3
2,869,198	+		EFB2_02710	0.35	+0.5
2,869,199	-		EFB2_02710	0.35	+1.1
2,869,214	+		EFB2_02710	0.36	+1.1
2,869,214	+		EFB2_02710	0.36	+1.3
2,869,214	+		EFB2_02710	0.36	+1.0
2,869,214	+		EFB2_02710	0.36	+0.2
2,869,214	+		EFB2_02710	0.36	-1.1
2,869,214	+		EFB2_02710	0.36	-0.4
2,869,215	-		EFB2_02710	0.36	-0.5
2,869,215	-		EFB2_02710	0.36	+1.6
2,869,215	-		EFB2_02710	0.36	+1.0
2,869,215	-		EFB2_02710	0.36	+1.4
2,869,216	+		EFB2_02710	0.36	+1.4
2,869,216	+		EFB2_02710	0.36	-0.3
2,869,216	+		EFB2_02710	0.36	-0.7
2,869,216	+		EFB2_02710	0.36	-1.3
2,869,216	+		EFB2_02710	0.36	-0.2
2,869,217	-		EFB2_02710	0.37	-1.4
2,869,217	-		EFB2_02710	0.37	+0.7
2,869,217	-		EFB2_02710	0.37	-2.9
2,869,241	+		EFB2_02710	0.39	+0.6
2,869,241	+		EFB2_02710	0.39	+1.5
2,869,245	+		EFB2_02710	0.39	-0.1
2,869,245	+		EFB2_02710	0.39	-0.2
2,869,281	+		EFB2_02710	0.42	-1.4
2,869,335	+		EFB2_02710	0.47	-1.8
2,869,341	+		EFB2_02710	0.48	-0.2
2,869,341	+		EFB2_02710	0.48	+0.5
2,869,341	+		EFB2_02710	0.48	+1.5
2,869,358	+		EFB2_02710	0.49	+0.1
2,869,358	+		EFB2_02710	0.49	+1.3
2,869,358	+		EFB2_02710	0.49	+0.7
2,869,358	+		EFB2_02710	0.49	-0.8
2,869,358	+		EFB2_02710	0.49	+5.7
2,869,358	+		EFB2_02710	0.49	+2.9
2,869,359	-		EFB2_02710	0.49	-0.5
2,869,359	-		EFB2_02710	0.49	-1.8
2,869,359	-		EFB2_02710	0.49	+2.8
2,869,359	-		EFB2_02710	0.49	-0.3
2,869,359	-		EFB2_02710	0.49	-1.1
2,869,365	+		EFB2_02710	0.50	-2.4
2,869,365	+		EFB2_02710	0.50	+1.6
2,869,365	+		EFB2_02710	0.50	-0.8
2,869,365	+		EFB2_02710	0.50	+0.8
2,869,410	-		EFB2_02710	0.54	-0.5
2,869,453	+		EFB2_02710	0.58	+1.3
2,869,469	-		EFB2_02710	0.59	+2.3
2,869,632	+		EFB2_02710	0.74	+0.7
2,869,632	+		EFB2_02710	0.74	+0.9
2,869,632	+		EFB2_02710	0.74	+0.3
2,869,632	+		EFB2_02710	0.74	+1.5
2,869,657	+		EFB2_02710	0.76	-0.2
2,869,722	+		EFB2_02710	0.82	-0.2
2,869,722	+		EFB2_02710	0.82	+1.3
2,869,722	+		EFB2_02710	0.82	+1.0
2,869,737	+		EFB2_02710	0.84	+0.2
2,869,747	+		EFB2_02710	0.85	-1.0
2,869,812	+				+0.6
2,869,812	+				-1.4
2,869,812	+				+0.0
2,869,812	+				-1.9
2,869,815	+				+0.8
2,869,815	+				-1.9
2,869,815	+				-2.4
2,869,816	-				-0.9
2,869,825	+				+0.1
2,869,825	+				-0.9
2,869,849	+				+0.4
2,869,849	+				+1.3
2,869,849	+				+1.1
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2,869,975	+				+0.5
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2,870,386	+		EFB2_02711	0.60	-0.2
2,870,386	+		EFB2_02711	0.60	+1.2
2,870,387	-		EFB2_02711	0.61	-0.6
2,870,426	+				+1.2
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2,870,463	+				+0.8
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2,870,464	-				+0.7
2,870,525	-				-2.4
2,870,537	-				-1.4
2,870,578	-				+1.2