Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04194

Experiment: a-Cyclodextrin 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin 2.5 mg/mL (C)
69,422	+		BACOVA_04192	0.34	-0.2
69,423	-		BACOVA_04192	0.35	-1.1
69,423	-		BACOVA_04192	0.35	-0.6
69,452	+		BACOVA_04192	0.40	+2.5
69,453	-		BACOVA_04192	0.40	+1.1
69,478	+		BACOVA_04192	0.44	-0.5
69,526	+		BACOVA_04192	0.53	-0.2
69,527	-		BACOVA_04192	0.53	-2.3
69,527	-		BACOVA_04192	0.53	-0.2
69,527	-		BACOVA_04192	0.53	+0.2
69,530	+		BACOVA_04192	0.54	-0.1
69,531	-		BACOVA_04192	0.54	-1.6
69,582	-		BACOVA_04192	0.63	-2.7
69,607	+		BACOVA_04192	0.67	+1.6
69,608	-		BACOVA_04192	0.67	-1.5
69,614	+		BACOVA_04192	0.68	+1.2
69,614	+		BACOVA_04192	0.68	-0.8
69,615	-		BACOVA_04192	0.69	-1.1
69,623	+		BACOVA_04192	0.70	-0.9
69,637	+		BACOVA_04192	0.73	-0.8
69,638	-		BACOVA_04192	0.73	-0.2
69,654	-		BACOVA_04192	0.76	-0.8
69,675	+		BACOVA_04192	0.79	+2.3
69,675	+		BACOVA_04192	0.79	+1.0
69,675	+		BACOVA_04192	0.79	-2.2
69,676	-		BACOVA_04192	0.79	+1.3
69,676	-		BACOVA_04192	0.79	+1.6
69,676	-		BACOVA_04192	0.79	+1.4
69,677	+		BACOVA_04192	0.80	-1.9
69,678	-		BACOVA_04192	0.80	+3.7
69,679	+		BACOVA_04192	0.80	-3.4
69,679	+		BACOVA_04192	0.80	-0.1
69,679	+		BACOVA_04192	0.80	+2.1
69,679	+		BACOVA_04192	0.80	+0.2
69,680	-		BACOVA_04192	0.80	-0.3
69,697	+		BACOVA_04192	0.83	+1.6
69,698	-		BACOVA_04192	0.83	+0.5
69,698	-		BACOVA_04192	0.83	-0.3
69,743	-				+1.9
69,743	-				+1.6
69,746	-				+0.1
69,746	-				-0.3
69,746	-				-0.3
69,789	+				+1.6
69,836	+				-1.8
69,837	-				+2.0
69,858	+				-0.1
69,859	-				+0.3
69,863	+				-3.8
69,863	+				+0.2
69,863	+				-0.9
69,864	-				-1.3
70,002	+				+2.8
70,012	-				-0.0
70,047	+		BACOVA_04193	0.35	+1.0
70,116	+				-1.6
70,116	+				-0.6
70,116	+				-2.1
70,131	-				-0.2
70,199	-				-1.2
70,210	-				+0.5
70,214	-				+0.2
70,293	-				+0.5
70,293	-				+1.6
70,317	-				-1.1
70,321	+				-1.0
70,326	+				-0.2
70,327	-				+2.2
70,329	-				+0.4
70,341	+				-0.2
70,341	+				+2.0
70,406	+				+1.3
70,455	-				+0.8
70,511	+				-0.1
70,517	+				-0.1
70,517	+				+0.6
70,517	+				+2.5
70,517	+				-1.2
70,521	-				-2.0
70,521	-				+0.4
70,523	-				-1.9
70,523	-				+1.7
70,565	+				+1.2
70,579	+				-2.7
70,579	+				+0.2
70,604	+				+0.4
70,605	-				-1.6
70,605	-				+0.4
70,606	+				-0.4
70,606	+				+0.6
70,688	-		BACOVA_04194	0.11	-1.1
70,691	+		BACOVA_04194	0.11	-0.9
70,692	-		BACOVA_04194	0.11	+1.0
70,692	-		BACOVA_04194	0.11	-2.2
70,733	+		BACOVA_04194	0.13	-0.8
70,759	+		BACOVA_04194	0.14	-0.2
70,946	-		BACOVA_04194	0.22	+1.6
70,947	+		BACOVA_04194	0.22	-2.9
70,947	+		BACOVA_04194	0.22	-0.2
70,947	+		BACOVA_04194	0.22	-0.6
70,948	-		BACOVA_04194	0.22	+1.2
70,993	+		BACOVA_04194	0.24	-1.7
70,993	+		BACOVA_04194	0.24	+0.0
71,000	-		BACOVA_04194	0.24	+0.4
71,000	-		BACOVA_04194	0.24	-1.0
71,001	+		BACOVA_04194	0.24	-0.4
71,068	+		BACOVA_04194	0.27	-3.4
71,069	-		BACOVA_04194	0.27	-1.3
71,069	-		BACOVA_04194	0.27	-0.2
71,081	+		BACOVA_04194	0.27	-0.1
71,082	-		BACOVA_04194	0.27	-1.0
71,125	+		BACOVA_04194	0.29	-0.5
71,125	+		BACOVA_04194	0.29	+1.7
71,126	-		BACOVA_04194	0.29	+0.7
71,143	+		BACOVA_04194	0.30	+0.9
71,144	-		BACOVA_04194	0.30	-0.5
71,144	-		BACOVA_04194	0.30	-1.3
71,172	+		BACOVA_04194	0.31	-1.5
71,214	+		BACOVA_04194	0.33	-0.0
71,215	-		BACOVA_04194	0.33	-0.6
71,341	+		BACOVA_04194	0.38	+0.1
71,414	-		BACOVA_04194	0.41	-1.4
71,506	+		BACOVA_04194	0.45	-0.0
71,533	+		BACOVA_04194	0.46	-2.4
71,533	+		BACOVA_04194	0.46	+0.8
71,533	+		BACOVA_04194	0.46	+1.1
71,533	+		BACOVA_04194	0.46	-0.0
71,582	-		BACOVA_04194	0.48	-1.1
71,644	-		BACOVA_04194	0.51	-0.8
71,660	+		BACOVA_04194	0.51	+0.2
71,701	-		BACOVA_04194	0.53	-2.3
71,726	-		BACOVA_04194	0.54	-1.3
71,732	-		BACOVA_04194	0.54	-0.9
71,732	-		BACOVA_04194	0.54	-1.1
71,738	+		BACOVA_04194	0.55	+0.8
71,771	+		BACOVA_04194	0.56	+0.9
71,789	+		BACOVA_04194	0.57	-0.3
71,790	-		BACOVA_04194	0.57	+0.1
71,790	-		BACOVA_04194	0.57	-0.0
71,865	-		BACOVA_04194	0.60	-0.9
71,910	-		BACOVA_04194	0.62	-0.1
71,925	+		BACOVA_04194	0.62	+1.0
71,929	+		BACOVA_04194	0.62	-0.5
71,951	-		BACOVA_04194	0.63	-1.0
71,951	-		BACOVA_04194	0.63	-1.7
72,013	-		BACOVA_04194	0.66	+0.4
72,018	-		BACOVA_04194	0.66	-0.3
72,018	-		BACOVA_04194	0.66	-1.1
72,035	+		BACOVA_04194	0.67	-1.3
72,035	+		BACOVA_04194	0.67	+2.1
72,035	+		BACOVA_04194	0.67	+0.6
72,036	-		BACOVA_04194	0.67	+0.9
72,036	-		BACOVA_04194	0.67	-0.5
72,036	-		BACOVA_04194	0.67	+0.1
72,053	+		BACOVA_04194	0.68	+1.3
72,168	+		BACOVA_04194	0.72	-1.7
72,169	-		BACOVA_04194	0.72	-1.5
72,173	-		BACOVA_04194	0.72	-0.2
72,173	-		BACOVA_04194	0.72	-1.8
72,174	+		BACOVA_04194	0.73	+0.6
72,175	-		BACOVA_04194	0.73	-0.4
72,187	+		BACOVA_04194	0.73	+0.3
72,188	-		BACOVA_04194	0.73	+1.2
72,188	-		BACOVA_04194	0.73	+1.1
72,188	-		BACOVA_04194	0.73	-1.9
72,189	+		BACOVA_04194	0.73	-0.4
72,205	+		BACOVA_04194	0.74	+1.0
72,206	-		BACOVA_04194	0.74	-3.7
72,208	-		BACOVA_04194	0.74	+0.5
72,226	-		BACOVA_04194	0.75	-1.2
72,304	+		BACOVA_04194	0.78	-1.1
72,305	-		BACOVA_04194	0.78	+1.8
72,310	-		BACOVA_04194	0.78	+1.9
72,310	-		BACOVA_04194	0.78	-1.4
72,374	-		BACOVA_04194	0.81	-0.1
72,386	+		BACOVA_04194	0.81	-0.2
72,475	-		BACOVA_04194	0.85	-1.3
72,479	+		BACOVA_04194	0.85	-1.4
72,479	+		BACOVA_04194	0.85	-0.8
72,480	-		BACOVA_04194	0.85	-0.9
72,510	+		BACOVA_04194	0.86	+0.4
72,555	+		BACOVA_04194	0.88	+0.6
72,555	+		BACOVA_04194	0.88	+0.1
72,555	+		BACOVA_04194	0.88	-0.8
72,556	-		BACOVA_04194	0.88	+0.0
72,667	-				+3.6
72,670	+				-0.9
72,671	-				-1.4
72,671	-				-1.1
72,671	-				+0.8
72,679	-				+0.7
72,720	+				+2.2
72,720	+				-1.8
72,721	-				+2.1
72,721	-				+0.0
72,725	+				+0.4
72,726	-				+0.6
72,769	+				-1.6
72,913	+		BACOVA_04195	0.11	+2.3
72,935	+		BACOVA_04195	0.14	-1.8
72,935	+		BACOVA_04195	0.14	-2.1
72,936	-		BACOVA_04195	0.14	-1.2
72,967	-		BACOVA_04195	0.18	-1.2
73,071	+		BACOVA_04195	0.33	+0.5
73,071	+		BACOVA_04195	0.33	-0.6
73,071	+		BACOVA_04195	0.33	+0.1
73,072	-		BACOVA_04195	0.33	+2.6
73,157	-		BACOVA_04195	0.45	-0.6
73,182	+		BACOVA_04195	0.48	-0.6
73,223	+		BACOVA_04195	0.54	-1.0
73,224	-		BACOVA_04195	0.54	-0.8
73,291	-		BACOVA_04195	0.64	-1.8
73,303	-		BACOVA_04195	0.65	+0.1
73,395	+		BACOVA_04195	0.78	-1.0
73,405	-		BACOVA_04195	0.79	-0.6
73,475	-		BACOVA_04195	0.89	-0.9
73,475	-		BACOVA_04195	0.89	-0.5
73,475	-		BACOVA_04195	0.89	+0.9
73,531	+				+1.5
73,546	-				-0.9
73,551	+				-0.4
73,552	-				-1.2
73,554	+				+0.3
73,555	-				-0.2
73,558	+				-0.6
73,571	-				+1.4
73,576	+				-0.1
73,679	-				-0.7
73,727	+		BACOVA_04196	0.13	-1.1
73,728	-		BACOVA_04196	0.13	-0.6
73,728	-		BACOVA_04196	0.13	+0.3
73,779	+		BACOVA_04196	0.17	+1.5
73,780	-		BACOVA_04196	0.17	-0.7
73,810	+		BACOVA_04196	0.20	-0.0
73,817	+		BACOVA_04196	0.20	-2.6
73,818	-		BACOVA_04196	0.20	-0.2