Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04024

Experiment: a-Cyclodextrin 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_04022 and BACOVA_04023 are separated by 21 nucleotidesBACOVA_04023 and BACOVA_04024 are separated by 110 nucleotidesBACOVA_04024 and BACOVA_04025 are separated by 18 nucleotides BACOVA_04022: BACOVA_04022 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit, at 356,835 to 357,509 _04022 BACOVA_04023: BACOVA_04023 - NADH:ubiquinone oxidoreductase, D subunit, at 357,531 to 358,172 _04023 BACOVA_04024: BACOVA_04024 - NADH:ubiquinone oxidoreductase, E subunit, at 358,283 to 358,909 _04024 BACOVA_04025: BACOVA_04025 - NADH:ubiquinone oxidoreductase, F subunit, at 358,928 to 360,202 _04025 Position (kb) 358 359Strain fitness (log2 ratio) -1 0 1at 358.111 kb on + strandat 358.111 kb on + strandat 358.211 kb on + strandat 358.230 kb on + strandat 358.251 kb on + strandat 358.267 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction a-Cyclodextrin 2.5 mg/mL (C)
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358,111 + -0.2
358,111 + -0.9
358,211 + -0.8
358,230 + -1.3
358,251 + +1.0
358,267 + -1.1

Or see this region's nucleotide sequence