Experiment: a-Cyclodextrin 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02455 and BACOVA_02456 are separated by 162 nucleotides BACOVA_02456 and BACOVA_02457 are separated by 51 nucleotides BACOVA_02457 and BACOVA_02458 are separated by 80 nucleotides
BACOVA_02455: BACOVA_02455 - site-specific recombinase, phage integrase family, at 217,865 to 218,818
_02455
BACOVA_02456: BACOVA_02456 - hypothetical protein, at 218,981 to 219,121
_02456
BACOVA_02457: BACOVA_02457 - transcription termination/antitermination factor NusG, at 219,173 to 219,748
_02457
BACOVA_02458: BACOVA_02458 - polysaccharide biosynthesis protein, at 219,829 to 221,364
_02458
Position (kb) 218
219
220 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 219.597 kb on + strand, within BACOVA_02457 at 219.630 kb on + strand, within BACOVA_02457 at 219.644 kb on - strand, within BACOVA_02457 at 219.644 kb on - strand, within BACOVA_02457 at 219.648 kb on + strand, within BACOVA_02457 at 219.648 kb on + strand, within BACOVA_02457 at 219.648 kb on + strand, within BACOVA_02457 at 219.655 kb on + strand, within BACOVA_02457 at 219.662 kb on - strand, within BACOVA_02457 at 219.683 kb on - strand, within BACOVA_02457 at 219.719 kb on + strand at 219.768 kb on + strand at 219.768 kb on + strand at 219.769 kb on - strand at 219.776 kb on - strand at 219.776 kb on - strand at 219.776 kb on - strand at 219.803 kb on - strand at 219.807 kb on + strand at 219.807 kb on + strand at 219.808 kb on - strand at 219.808 kb on - strand at 219.814 kb on - strand at 219.814 kb on - strand at 219.815 kb on + strand at 219.816 kb on - strand at 219.870 kb on + strand at 219.891 kb on + strand at 219.892 kb on - strand at 219.917 kb on + strand at 219.918 kb on - strand at 219.920 kb on - strand at 219.922 kb on - strand at 219.936 kb on - strand at 219.939 kb on - strand at 219.969 kb on - strand at 219.971 kb on - strand at 219.971 kb on - strand at 219.971 kb on - strand at 219.971 kb on - strand at 219.971 kb on - strand at 219.973 kb on - strand at 219.981 kb on - strand at 219.981 kb on - strand at 219.981 kb on - strand at 219.993 kb on - strand, within BACOVA_02458 at 220.119 kb on - strand, within BACOVA_02458
Per-strain Table
Position Strand Gene LocusTag Fraction a-Cyclodextrin 2.5 mg/mL (C) remove 219,597 + BACOVA_02457 0.74 -1.6 219,630 + BACOVA_02457 0.79 -0.3 219,644 - BACOVA_02457 0.82 +0.8 219,644 - BACOVA_02457 0.82 -0.0 219,648 + BACOVA_02457 0.82 -0.2 219,648 + BACOVA_02457 0.82 -0.7 219,648 + BACOVA_02457 0.82 +0.1 219,655 + BACOVA_02457 0.84 -1.8 219,662 - BACOVA_02457 0.85 -2.4 219,683 - BACOVA_02457 0.89 +1.1 219,719 + -1.6 219,768 + -0.3 219,768 + -0.9 219,769 - +2.3 219,776 - -0.4 219,776 - -2.0 219,776 - +1.7 219,803 - -1.7 219,807 + +0.4 219,807 + -1.4 219,808 - +0.3 219,808 - -0.6 219,814 - +3.0 219,814 - +0.3 219,815 + +1.1 219,816 - +1.3 219,870 + -1.6 219,891 + +0.4 219,892 - +1.0 219,917 + -0.2 219,918 - +2.1 219,920 - -0.8 219,922 - +0.0 219,936 - +2.0 219,939 - -0.7 219,969 - +0.3 219,971 - +1.0 219,971 - +0.0 219,971 - +0.1 219,971 - +2.8 219,971 - -0.3 219,973 - +1.9 219,981 - +0.4 219,981 - +2.0 219,981 - +0.9 219,993 - BACOVA_02458 0.11 +0.3 220,119 - BACOVA_02458 0.19 +1.4
Or see this region's nucleotide sequence