Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00236

Experiment: a-Cyclodextrin 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin 2.5 mg/mL (C)
8,504	+		BACOVA_00234	0.76	-0.3
8,504	+		BACOVA_00234	0.76	+0.1
8,531	-		BACOVA_00234	0.80	-1.1
8,564	+		BACOVA_00234	0.84	-1.7
8,576	-		BACOVA_00234	0.85	-0.6
8,578	+		BACOVA_00234	0.85	+1.6
8,578	+		BACOVA_00234	0.85	-0.7
8,578	+		BACOVA_00234	0.85	-0.6
8,609	+		BACOVA_00234	0.89	+2.6
8,609	+		BACOVA_00234	0.89	-0.1
8,610	-		BACOVA_00234	0.89	+0.8
8,610	-		BACOVA_00234	0.89	-0.0
8,610	-		BACOVA_00234	0.89	-0.4
8,610	-		BACOVA_00234	0.89	-1.1
8,612	-		BACOVA_00234	0.89	-1.2
8,614	+		BACOVA_00234	0.90	+0.8
8,615	-		BACOVA_00234	0.90	+0.6
8,630	-				-0.8
8,643	+				+0.1
8,643	+				-1.3
8,643	+				+2.0
8,653	-				-2.1
8,653	-				+2.2
8,658	-				-1.7
8,700	+				+0.7
8,701	-				-1.4
8,821	+		BACOVA_00235	0.14	-0.7
8,835	+		BACOVA_00235	0.16	-0.1
8,869	+		BACOVA_00235	0.21	+0.6
8,882	+		BACOVA_00235	0.23	+1.4
8,896	+		BACOVA_00235	0.25	-0.2
8,904	+		BACOVA_00235	0.26	+1.8
8,905	-		BACOVA_00235	0.26	-0.4
8,963	+		BACOVA_00235	0.34	-2.0
8,979	+		BACOVA_00235	0.36	-2.0
8,990	-		BACOVA_00235	0.37	+1.4
8,990	-		BACOVA_00235	0.37	-1.7
9,095	+		BACOVA_00235	0.52	+0.7
9,194	+		BACOVA_00235	0.65	-1.2
9,194	+		BACOVA_00235	0.65	+0.0
9,195	-		BACOVA_00235	0.65	-0.0
9,195	-		BACOVA_00235	0.65	-1.9
9,247	-		BACOVA_00235	0.72	+2.2
9,374	+		BACOVA_00235	0.90	+0.5
9,375	-		BACOVA_00235	0.90	-0.7
9,375	-		BACOVA_00235	0.90	+0.6
9,388	-				-1.4
9,476	-				-1.0
9,490	-				+0.5
9,521	+				+2.3
9,521	+				-0.7
9,581	+		BACOVA_00236	0.31	-0.6
9,594	-		BACOVA_00236	0.36	-0.5
9,594	-		BACOVA_00236	0.36	+0.3
9,596	-		BACOVA_00236	0.37	+1.6
9,596	-		BACOVA_00236	0.37	-1.0
9,598	+		BACOVA_00236	0.37	+1.9
9,599	-		BACOVA_00236	0.38	-0.4
9,599	-		BACOVA_00236	0.38	-0.3
9,617	+		BACOVA_00236	0.44	+0.9
9,617	+		BACOVA_00236	0.44	-0.1
9,618	-		BACOVA_00236	0.44	-0.7
9,618	-		BACOVA_00236	0.44	+0.9
9,627	+		BACOVA_00236	0.48	-0.2
9,627	+		BACOVA_00236	0.48	-0.3
9,627	+		BACOVA_00236	0.48	+1.6
9,641	+		BACOVA_00236	0.53	-1.1
9,644	-		BACOVA_00236	0.54	+2.2
9,671	-		BACOVA_00236	0.63	+0.4
9,674	+		BACOVA_00236	0.65	-1.2
9,674	+		BACOVA_00236	0.65	+1.2
9,681	+		BACOVA_00236	0.67	-0.1
9,689	-		BACOVA_00236	0.70	+1.2
9,707	-		BACOVA_00236	0.76	+0.1
9,758	+				+0.3
9,763	+				+2.9
9,764	-				-0.4
9,828	+				-0.6
9,844	+				-1.0
9,882	-				-0.3
9,936	+		BACOVA_00237	0.13	+0.0
9,936	+		BACOVA_00237	0.13	+0.6
9,936	+		BACOVA_00237	0.13	+0.1
9,936	+		BACOVA_00237	0.13	+1.1
9,936	+		BACOVA_00237	0.13	-3.5
9,937	-		BACOVA_00237	0.13	+0.5
9,937	-		BACOVA_00237	0.13	-1.1
9,938	+		BACOVA_00237	0.13	-1.4
9,939	-		BACOVA_00237	0.13	+0.2
9,939	-		BACOVA_00237	0.13	-1.0
9,985	+		BACOVA_00237	0.17	-0.9
9,985	+		BACOVA_00237	0.17	+0.2
9,986	-		BACOVA_00237	0.17	+0.8
9,986	-		BACOVA_00237	0.17	+0.5
9,988	+		BACOVA_00237	0.17	-0.3
9,989	-		BACOVA_00237	0.17	+0.6
9,990	+		BACOVA_00237	0.17	-0.7
9,991	-		BACOVA_00237	0.17	+1.4
9,991	-		BACOVA_00237	0.17	+0.4
9,992	+		BACOVA_00237	0.17	+0.5
9,992	+		BACOVA_00237	0.17	+0.6
9,992	+		BACOVA_00237	0.17	+1.3
9,992	+		BACOVA_00237	0.17	-1.3
9,993	-		BACOVA_00237	0.17	+0.6
10,002	+		BACOVA_00237	0.18	+0.4
10,073	-		BACOVA_00237	0.24	-0.5
10,180	+		BACOVA_00237	0.32	+0.8
10,181	-		BACOVA_00237	0.32	+0.5
10,241	-		BACOVA_00237	0.37	-0.5
10,241	-		BACOVA_00237	0.37	+0.3
10,243	-		BACOVA_00237	0.37	+3.0
10,244	+		BACOVA_00237	0.37	-1.0
10,244	+		BACOVA_00237	0.37	-0.6
10,245	-		BACOVA_00237	0.37	-0.2
10,245	-		BACOVA_00237	0.37	-0.1
10,245	-		BACOVA_00237	0.37	-0.6
10,246	+		BACOVA_00237	0.37	+0.0
10,246	+		BACOVA_00237	0.37	+1.4
10,246	+		BACOVA_00237	0.37	-0.0
10,246	+		BACOVA_00237	0.37	+0.3
10,248	+		BACOVA_00237	0.37	-0.1
10,248	+		BACOVA_00237	0.37	-1.1
10,249	-		BACOVA_00237	0.37	+2.4
10,249	-		BACOVA_00237	0.37	+1.4
10,249	-		BACOVA_00237	0.37	+0.8
10,258	-		BACOVA_00237	0.38	+2.0
10,258	-		BACOVA_00237	0.38	+0.5
10,317	+		BACOVA_00237	0.43	+0.8
10,318	-		BACOVA_00237	0.43	+0.3
10,348	+		BACOVA_00237	0.45	-1.6
10,349	-		BACOVA_00237	0.45	+1.8
10,349	-		BACOVA_00237	0.45	-0.2
10,349	-		BACOVA_00237	0.45	+1.8
10,369	+		BACOVA_00237	0.47	+2.9
10,403	+		BACOVA_00237	0.49	+0.9
10,403	+		BACOVA_00237	0.49	+0.7
10,416	+		BACOVA_00237	0.50	+1.4
10,470	+		BACOVA_00237	0.55	-0.3
10,483	-		BACOVA_00237	0.56	-0.9
10,486	+		BACOVA_00237	0.56	+1.0
10,486	+		BACOVA_00237	0.56	+0.5
10,487	-		BACOVA_00237	0.56	-0.7
10,497	+		BACOVA_00237	0.57	-0.5
10,515	+		BACOVA_00237	0.58	-0.7
10,539	+		BACOVA_00237	0.60	-0.4
10,556	-		BACOVA_00237	0.61	+0.2
10,596	+		BACOVA_00237	0.64	-0.5
10,607	+		BACOVA_00237	0.65	+1.3
10,658	-		BACOVA_00237	0.69	-0.3
10,746	+		BACOVA_00237	0.76	-0.3
10,746	+		BACOVA_00237	0.76	-0.1
10,763	+		BACOVA_00237	0.77	-1.5