Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00224

Experiment: L-Arginine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00223 and MPMX26_00224 are separated by 92 nucleotidesMPMX26_00224 and MPMX26_00225 are separated by 225 nucleotides MPMX26_00223: MPMX26_00223 - hypothetical protein, at 239,802 to 240,551 _00223 MPMX26_00224: MPMX26_00224 - hypothetical protein, at 240,644 to 241,435 _00224 MPMX26_00225: MPMX26_00225 - 3-ketoacyl-CoA thiolase, at 241,661 to 242,833 _00225 Position (kb) 240 241 242Strain fitness (log2 ratio) -1 0 1at 239.836 kb on + strandat 239.869 kb on + strandat 239.906 kb on + strand, within MPMX26_00223at 239.906 kb on + strand, within MPMX26_00223at 239.976 kb on - strand, within MPMX26_00223at 240.273 kb on + strand, within MPMX26_00223at 240.416 kb on + strand, within MPMX26_00223at 240.449 kb on + strand, within MPMX26_00223at 240.531 kb on + strandat 240.531 kb on + strandat 240.699 kb on - strandat 240.699 kb on - strandat 240.757 kb on - strand, within MPMX26_00224at 240.800 kb on - strand, within MPMX26_00224at 240.800 kb on - strand, within MPMX26_00224at 240.805 kb on - strand, within MPMX26_00224at 240.805 kb on - strand, within MPMX26_00224at 240.835 kb on - strand, within MPMX26_00224at 240.852 kb on - strand, within MPMX26_00224at 240.852 kb on - strand, within MPMX26_00224at 240.873 kb on - strand, within MPMX26_00224at 241.110 kb on - strand, within MPMX26_00224at 241.118 kb on - strand, within MPMX26_00224at 241.120 kb on - strand, within MPMX26_00224at 241.151 kb on - strand, within MPMX26_00224at 241.309 kb on - strand, within MPMX26_00224at 241.331 kb on - strand, within MPMX26_00224at 241.333 kb on - strand, within MPMX26_00224at 241.333 kb on - strand, within MPMX26_00224at 241.333 kb on - strand, within MPMX26_00224at 241.338 kb on - strand, within MPMX26_00224at 241.473 kb on - strandat 241.473 kb on - strandat 241.473 kb on - strandat 241.640 kb on - strandat 241.658 kb on + strandat 241.666 kb on - strandat 241.691 kb on - strandat 241.691 kb on - strandat 241.696 kb on - strandat 241.696 kb on - strandat 241.696 kb on - strandat 241.696 kb on - strandat 241.701 kb on - strandat 241.701 kb on - strandat 241.701 kb on - strandat 241.701 kb on - strandat 241.701 kb on - strandat 241.701 kb on - strandat 241.741 kb on + strandat 241.744 kb on - strandat 241.759 kb on - strandat 241.764 kb on - strandat 241.764 kb on - strandat 241.764 kb on - strandat 241.772 kb on - strandat 241.774 kb on - strandat 241.777 kb on + strandat 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.787 kb on + strand, within MPMX26_00225at 241.795 kb on - strand, within MPMX26_00225at 241.795 kb on - strand, within MPMX26_00225at 241.795 kb on - strand, within MPMX26_00225at 241.826 kb on - strand, within MPMX26_00225at 241.843 kb on - strand, within MPMX26_00225at 241.852 kb on + strand, within MPMX26_00225at 241.852 kb on + strand, within MPMX26_00225at 241.860 kb on + strand, within MPMX26_00225at 241.860 kb on - strand, within MPMX26_00225at 241.860 kb on - strand, within MPMX26_00225at 241.860 kb on - strand, within MPMX26_00225at 241.860 kb on - strand, within MPMX26_00225at 241.860 kb on - strand, within MPMX26_00225at 241.860 kb on - strand, within MPMX26_00225at 241.861 kb on - strand, within MPMX26_00225at 241.868 kb on - strand, within MPMX26_00225at 241.870 kb on - strand, within MPMX26_00225at 241.871 kb on + strand, within MPMX26_00225at 241.879 kb on - strand, within MPMX26_00225at 241.879 kb on - strand, within MPMX26_00225at 241.911 kb on - strand, within MPMX26_00225at 241.951 kb on - strand, within MPMX26_00225at 242.008 kb on - strand, within MPMX26_00225at 242.016 kb on - strand, within MPMX26_00225at 242.043 kb on - strand, within MPMX26_00225at 242.043 kb on - strand, within MPMX26_00225at 242.049 kb on - strand, within MPMX26_00225at 242.075 kb on - strand, within MPMX26_00225at 242.109 kb on - strand, within MPMX26_00225at 242.109 kb on - strand, within MPMX26_00225at 242.109 kb on - strand, within MPMX26_00225at 242.109 kb on - strand, within MPMX26_00225at 242.112 kb on - strand, within MPMX26_00225at 242.119 kb on - strand, within MPMX26_00225at 242.135 kb on - strand, within MPMX26_00225at 242.149 kb on - strand, within MPMX26_00225at 242.149 kb on - strand, within MPMX26_00225at 242.149 kb on - strand, within MPMX26_00225at 242.161 kb on - strand, within MPMX26_00225at 242.169 kb on - strand, within MPMX26_00225at 242.195 kb on - strand, within MPMX26_00225at 242.200 kb on - strand, within MPMX26_00225at 242.213 kb on - strand, within MPMX26_00225at 242.301 kb on - strand, within MPMX26_00225at 242.322 kb on - strand, within MPMX26_00225at 242.322 kb on - strand, within MPMX26_00225at 242.322 kb on - strand, within MPMX26_00225at 242.327 kb on - strand, within MPMX26_00225at 242.337 kb on - strand, within MPMX26_00225at 242.346 kb on - strand, within MPMX26_00225at 242.346 kb on - strand, within MPMX26_00225at 242.346 kb on - strand, within MPMX26_00225at 242.346 kb on - strand, within MPMX26_00225at 242.380 kb on - strand, within MPMX26_00225at 242.415 kb on - strand, within MPMX26_00225at 242.426 kb on - strand, within MPMX26_00225

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
remove
239,836 + -0.0
239,869 + +0.2
239,906 + MPMX26_00223 0.14 +1.5
239,906 + MPMX26_00223 0.14 +1.4
239,976 - MPMX26_00223 0.23 +0.4
240,273 + MPMX26_00223 0.63 +0.6
240,416 + MPMX26_00223 0.82 +0.7
240,449 + MPMX26_00223 0.86 +0.7
240,531 + +0.6
240,531 + +0.1
240,699 - -0.1
240,699 - +0.1
240,757 - MPMX26_00224 0.14 -1.3
240,800 - MPMX26_00224 0.20 -1.0
240,800 - MPMX26_00224 0.20 -1.2
240,805 - MPMX26_00224 0.20 -0.6
240,805 - MPMX26_00224 0.20 +0.1
240,835 - MPMX26_00224 0.24 -0.3
240,852 - MPMX26_00224 0.26 -0.9
240,852 - MPMX26_00224 0.26 -0.2
240,873 - MPMX26_00224 0.29 +0.8
241,110 - MPMX26_00224 0.59 -0.8
241,118 - MPMX26_00224 0.60 +0.5
241,120 - MPMX26_00224 0.60 -1.2
241,151 - MPMX26_00224 0.64 +0.0
241,309 - MPMX26_00224 0.84 +1.0
241,331 - MPMX26_00224 0.87 +0.6
241,333 - MPMX26_00224 0.87 -0.8
241,333 - MPMX26_00224 0.87 -0.2
241,333 - MPMX26_00224 0.87 -0.4
241,338 - MPMX26_00224 0.88 +0.4
241,473 - -0.3
241,473 - +0.9
241,473 - +0.2
241,640 - -0.8
241,658 + -1.7
241,666 - +0.3
241,691 - -0.2
241,691 - +0.1
241,696 - +0.3
241,696 - -0.6
241,696 - +0.7
241,696 - -0.2
241,701 - +0.3
241,701 - -0.3
241,701 - -0.0
241,701 - -0.0
241,701 - -0.0
241,701 - -0.5
241,741 + -1.2
241,744 - -0.4
241,759 - +0.0
241,764 - +0.3
241,764 - -0.5
241,764 - +0.2
241,772 - -0.4
241,774 - +0.0
241,777 + -0.1
241,785 - MPMX26_00225 0.11 +0.4
241,785 - MPMX26_00225 0.11 +0.5
241,785 - MPMX26_00225 0.11 -0.0
241,785 - MPMX26_00225 0.11 +0.6
241,785 - MPMX26_00225 0.11 +0.3
241,785 - MPMX26_00225 0.11 -0.1
241,785 - MPMX26_00225 0.11 +0.3
241,785 - MPMX26_00225 0.11 -0.2
241,785 - MPMX26_00225 0.11 -0.9
241,785 - MPMX26_00225 0.11 -0.3
241,785 - MPMX26_00225 0.11 +0.4
241,785 - MPMX26_00225 0.11 +0.5
241,785 - MPMX26_00225 0.11 -0.3
241,785 - MPMX26_00225 0.11 -0.6
241,787 + MPMX26_00225 0.11 -0.8
241,795 - MPMX26_00225 0.11 -0.3
241,795 - MPMX26_00225 0.11 -0.0
241,795 - MPMX26_00225 0.11 -0.2
241,826 - MPMX26_00225 0.14 +0.0
241,843 - MPMX26_00225 0.16 -0.3
241,852 + MPMX26_00225 0.16 +0.8
241,852 + MPMX26_00225 0.16 +0.9
241,860 + MPMX26_00225 0.17 +0.7
241,860 - MPMX26_00225 0.17 -1.2
241,860 - MPMX26_00225 0.17 +0.2
241,860 - MPMX26_00225 0.17 -0.2
241,860 - MPMX26_00225 0.17 -0.1
241,860 - MPMX26_00225 0.17 +0.4
241,860 - MPMX26_00225 0.17 -0.4
241,861 - MPMX26_00225 0.17 -0.2
241,868 - MPMX26_00225 0.18 +1.4
241,870 - MPMX26_00225 0.18 -0.3
241,871 + MPMX26_00225 0.18 +0.8
241,879 - MPMX26_00225 0.19 -0.2
241,879 - MPMX26_00225 0.19 +0.0
241,911 - MPMX26_00225 0.21 -0.2
241,951 - MPMX26_00225 0.25 -0.3
242,008 - MPMX26_00225 0.30 +0.1
242,016 - MPMX26_00225 0.30 -0.3
242,043 - MPMX26_00225 0.33 +0.0
242,043 - MPMX26_00225 0.33 -0.3
242,049 - MPMX26_00225 0.33 -0.3
242,075 - MPMX26_00225 0.35 +0.5
242,109 - MPMX26_00225 0.38 -0.0
242,109 - MPMX26_00225 0.38 +0.3
242,109 - MPMX26_00225 0.38 -0.2
242,109 - MPMX26_00225 0.38 +0.4
242,112 - MPMX26_00225 0.38 -0.2
242,119 - MPMX26_00225 0.39 -0.3
242,135 - MPMX26_00225 0.40 +0.4
242,149 - MPMX26_00225 0.42 -0.1
242,149 - MPMX26_00225 0.42 -0.1
242,149 - MPMX26_00225 0.42 -0.3
242,161 - MPMX26_00225 0.43 +0.1
242,169 - MPMX26_00225 0.43 +0.2
242,195 - MPMX26_00225 0.46 -0.1
242,200 - MPMX26_00225 0.46 -0.0
242,213 - MPMX26_00225 0.47 +0.0
242,301 - MPMX26_00225 0.55 -0.1
242,322 - MPMX26_00225 0.56 +0.2
242,322 - MPMX26_00225 0.56 +0.4
242,322 - MPMX26_00225 0.56 -0.2
242,327 - MPMX26_00225 0.57 +0.1
242,337 - MPMX26_00225 0.58 -0.1
242,346 - MPMX26_00225 0.58 +0.7
242,346 - MPMX26_00225 0.58 -0.1
242,346 - MPMX26_00225 0.58 -0.1
242,346 - MPMX26_00225 0.58 -1.3
242,380 - MPMX26_00225 0.61 -0.1
242,415 - MPMX26_00225 0.64 +0.5
242,426 - MPMX26_00225 0.65 +1.7

Or see this region's nucleotide sequence