Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5657

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,678,793	-		GFF5655	0.63	-0.0
2,678,987	+		GFF5655	0.83	+0.5
2,678,988	-		GFF5655	0.83	-0.4
2,678,988	-		GFF5655	0.83	-0.3
2,679,110	-				-0.4
2,679,148	+				+0.3
2,679,148	+				-0.2
2,679,148	+				-0.3
2,679,149	-				-0.0
2,679,571	+		GFF5656	0.76	-1.2
2,679,571	+		GFF5656	0.76	-0.1
2,679,631	+		GFF5656	0.86	-0.0
2,679,632	-		GFF5656	0.86	+0.1
2,679,632	-		GFF5656	0.86	-0.8
2,679,745	+				-0.3
2,680,021	+		GFF5657	0.21	-0.3
2,680,579	+		GFF5657	0.67	+1.1
2,680,849	+		GFF5657	0.89	-1.6
2,680,849	+		GFF5657	0.89	-0.2
2,681,301	+		GFF5658	0.19	+0.3
2,681,436	+		GFF5658	0.27	+0.5