Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5649

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,671,637	-		GFF5648	0.47	+0.4
2,671,858	+		GFF5648	0.61	-0.5
2,671,859	-		GFF5648	0.61	+0.5
2,671,972	+		GFF5648	0.69	-0.1
2,671,972	+		GFF5648	0.69	+0.5
2,671,972	+		GFF5648	0.69	+1.9
2,672,044	+		GFF5648	0.73	-0.0
2,672,045	-		GFF5648	0.73	+0.9
2,672,186	-		GFF5648	0.82	+0.6
2,672,186	-		GFF5648	0.82	+0.1
2,672,186	-		GFF5648	0.82	-0.1
2,672,269	+		GFF5648	0.88	-0.9
2,672,534	-				+1.1
2,672,675	-		GFF5649	0.16	-0.1
2,672,738	-		GFF5649	0.22	-0.1
2,672,802	-		GFF5649	0.27	-0.7
2,674,274	+		GFF5651	0.15	-0.1
2,674,332	-		GFF5651	0.21	+0.8
2,674,332	-		GFF5651	0.21	+0.6