Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5302

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,314,476	-		GFF5300	0.75	+0.1
2,314,637	+		GFF5300	0.86	-0.2
2,314,637	+		GFF5300	0.86	+0.8
2,314,637	+		GFF5300	0.86	+0.1
2,314,637	+		GFF5300	0.86	-0.4
2,314,638	-		GFF5300	0.86	-0.7
2,314,638	-		GFF5300	0.86	-0.4
2,315,098	+		GFF5301	0.44	-0.0
2,315,099	-		GFF5301	0.44	+0.5
2,315,099	-		GFF5301	0.44	-0.0
2,315,176	+		GFF5301	0.57	+0.1
2,315,460	-				+0.0
2,315,460	-				+0.4
2,315,526	-		GFF5302	0.37	-0.2
2,315,611	+		GFF5302	0.84	-0.2
2,315,646	-				-0.3
2,315,660	+				+0.3
2,315,661	-				+0.1
2,316,563	-		GFF5304	0.81	+0.9
2,316,571	+		GFF5304	0.84	-0.0
2,316,571	+		GFF5304	0.84	+0.6