Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4998

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,014,482	-		GFF4997	0.50	+0.3
2,014,512	-		GFF4997	0.53	-0.1
2,014,574	+		GFF4997	0.59	+0.9
2,014,575	-		GFF4997	0.59	+0.5
2,014,575	-		GFF4997	0.59	+0.5
2,014,575	-		GFF4997	0.59	-0.8
2,014,635	-		GFF4997	0.65	+0.2
2,014,686	-		GFF4997	0.70	-0.4
2,015,174	-		GFF4998	0.18	-1.0
2,015,194	+		GFF4998	0.21	-0.2
2,015,683	-				+0.2
2,015,813	-		GFF4999	0.30	+0.2
2,015,849	-		GFF4999	0.42	+1.3
2,015,849	-		GFF4999	0.42	-1.1
2,015,869	+		GFF4999	0.48	+0.1
2,016,393	+		GFF5000	0.44	+0.8
2,016,394	-		GFF5000	0.44	+0.3
2,016,528	+		GFF5000	0.60	-0.2
2,016,528	+		GFF5000	0.60	+0.7