Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4917

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
1,931,003	+		GFF4916	0.70	-1.0
1,931,003	+		GFF4916	0.70	+1.0
1,931,003	+		GFF4916	0.70	-0.3
1,931,003	+		GFF4916	0.70	-0.6
1,931,003	+		GFF4916	0.70	-0.4
1,931,003	+		GFF4916	0.70	+0.2
1,931,003	+		GFF4916	0.70	+0.4
1,931,003	+		GFF4916	0.70	-0.5
1,931,004	-		GFF4916	0.71	+0.8
1,931,004	-		GFF4916	0.71	+0.4
1,931,004	-		GFF4916	0.71	-0.0
1,931,004	-		GFF4916	0.71	+0.6
1,931,004	-		GFF4916	0.71	-0.5
1,931,004	-		GFF4916	0.71	+0.1
1,931,004	-		GFF4916	0.71	-0.1
1,931,004	-		GFF4916	0.71	-0.0
1,931,150	+				+1.5
1,931,150	+				-0.1
1,931,150	+				-0.1
1,931,150	+				-0.0
1,931,150	+				+0.4
1,931,151	-				+0.1
1,931,151	-				+0.3
1,931,487	+		GFF4917	0.26	-0.5
1,931,487	+		GFF4917	0.26	-0.9
1,931,488	-		GFF4917	0.26	-1.2
1,931,488	-		GFF4917	0.26	+0.9
1,931,488	-		GFF4917	0.26	-1.2
1,931,612	+		GFF4917	0.36	+0.0
1,931,985	+		GFF4917	0.65	-0.2
1,931,985	+		GFF4917	0.65	-0.0
1,931,986	-		GFF4917	0.65	-0.8
1,932,162	+		GFF4917	0.79	-0.4
1,932,162	+		GFF4917	0.79	-0.2
1,932,163	-		GFF4917	0.79	+1.8
1,932,163	-		GFF4917	0.79	+0.1
1,932,163	-		GFF4917	0.79	-0.4
1,932,163	-		GFF4917	0.79	-0.0
1,932,433	-				-0.0
1,932,588	+				-0.2
1,932,588	+				+0.3
1,932,589	-				+0.1
1,932,589	-				-1.0
1,932,589	-				-1.1
1,932,589	-				+0.4
1,932,589	-				+0.1
1,932,589	-				+0.2