Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4761

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
1,767,606	+		GFF4760	0.58	+1.5
1,767,607	-		GFF4760	0.59	-0.1
1,767,612	+		GFF4760	0.59	+0.3
1,767,613	-		GFF4760	0.59	+0.3
1,767,613	-		GFF4760	0.59	+0.1
1,767,613	-		GFF4760	0.59	+0.6
1,767,615	+		GFF4760	0.59	+0.4
1,767,615	+		GFF4760	0.59	+0.3
1,767,616	-		GFF4760	0.59	+0.5
1,767,616	-		GFF4760	0.59	+1.9
1,767,616	-		GFF4760	0.59	+0.3
1,767,616	-		GFF4760	0.59	+0.1
1,768,050	+				+0.3
1,768,050	+				+0.2
1,768,050	+				-0.0
1,768,050	+				-0.1
1,768,051	-				-0.1
1,768,051	-				-0.1
1,768,179	-				+0.1
1,768,179	-				-0.4
1,768,636	+		GFF4762	0.25	+0.4
1,768,840	+		GFF4762	0.42	+0.1
1,768,840	+		GFF4762	0.42	-0.5
1,768,841	-		GFF4762	0.42	-0.2
1,769,149	+		GFF4762	0.68	+0.3
1,769,149	+		GFF4762	0.68	-0.4
1,769,149	+		GFF4762	0.68	+0.0
1,769,149	+		GFF4762	0.68	+0.1
1,769,149	+		GFF4762	0.68	-0.2
1,769,149	+		GFF4762	0.68	+0.7
1,769,150	-		GFF4762	0.68	+0.4
1,769,150	-		GFF4762	0.68	-0.1
1,769,150	-		GFF4762	0.68	+0.7
1,769,153	-		GFF4762	0.69	-0.4
1,769,234	-		GFF4762	0.75	+0.7
1,769,234	-		GFF4762	0.75	+0.2
1,769,272	+		GFF4762	0.79	-0.0