Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4721

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
1,672,861	-		GFF4720	0.43	-0.5
1,673,313	+		GFF4720	0.90	-0.1
1,673,314	-		GFF4720	0.90	-0.2
1,673,314	-		GFF4720	0.90	+1.3
1,673,314	-		GFF4720	0.90	+0.4
1,673,407	-				-0.1
1,673,407	-				+1.8
1,673,440	+				-0.0
1,673,441	-				-0.6
1,673,678	+		GFF4721	0.23	-0.1
1,673,678	+		GFF4721	0.23	-0.5
1,673,678	+		GFF4721	0.23	-0.3
1,673,678	+		GFF4721	0.23	+0.1
1,673,679	-		GFF4721	0.23	+0.8
1,673,879	+		GFF4721	0.47	-0.4
1,673,880	-		GFF4721	0.47	+0.6
1,673,955	-		GFF4721	0.57	-0.7
1,674,263	+				-0.4
1,674,263	+				+0.9
1,674,264	-				-0.2
1,674,264	-				-0.3
1,675,247	+		GFF4723	0.11	+1.2