Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4631

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
1,582,663	-				-0.0
1,582,663	-				-0.3
1,582,663	-				-0.3
1,582,663	-				-0.1
1,582,712	-				-0.4
1,582,715	+				+0.2
1,582,715	+				+0.1
1,582,715	+				+0.8
1,582,715	+				+0.6
1,582,715	+				+0.6
1,582,716	-				-1.1
1,582,716	-				+0.2
1,582,716	-				-1.7
1,582,716	-				+0.4
1,582,716	-				+0.1
1,582,716	-				+1.3
1,582,734	+				-0.2
1,582,734	+				-0.0
1,582,748	+				-0.1
1,582,749	-				+0.1
1,582,833	-				-0.1
1,582,846	+				+0.5
1,582,893	+				+0.1
1,582,893	+				+1.1
1,582,933	+				+0.2
1,582,935	+				+0.1
1,582,940	+				-0.3
1,582,940	+				+0.0
1,582,940	+				+0.6
1,582,940	+				+0.5
1,582,940	+				-0.1
1,582,940	+				-1.2
1,582,941	-				+0.7
1,583,015	-				+0.2
1,583,078	-				+0.1
1,583,094	+				-0.3
1,583,094	+				+1.2
1,583,094	+				-0.6
1,583,095	-				+1.1
1,583,095	-				-0.3
1,583,096	+				+0.3
1,583,096	+				-0.3
1,583,096	+				+0.6
1,583,096	+				-0.6
1,583,096	+				+0.3
1,583,097	-				-0.5
1,583,250	+				+0.6
1,583,250	+				-0.2
1,583,250	+				-0.4
1,583,251	-				-1.0
1,583,251	-				+1.6
1,583,326	+				-0.9
1,583,327	+				+0.4
1,583,327	+				-0.4
1,583,327	+				-0.3
1,583,327	+				+0.3
1,583,327	+				+0.0
1,583,327	+				+0.2
1,583,327	+				-1.3
1,583,327	+				-1.0
1,583,327	+				-0.1
1,583,327	+				-0.8
1,583,327	+				+0.0
1,583,327	+				-0.5
1,583,327	+				-0.7
1,583,328	-				-0.2
1,583,328	-				-0.5
1,583,328	-				-0.4
1,583,328	-				-0.3
1,583,328	-				-0.0
1,583,328	-				+0.6
1,583,328	-				-0.2
1,583,328	-				-0.9
1,583,328	-				-2.3
1,583,328	-				+1.0
1,583,501	+				+0.5
1,583,501	+				-0.1
1,583,501	+				-1.0
1,583,501	+				+0.4
1,583,502	-				+0.7
1,583,502	-				-0.4
1,583,509	+				+0.9
1,583,510	-				+0.1
1,583,510	-				-0.1
1,583,510	-				+1.1
1,583,510	-				+1.2
1,583,510	-				-0.4
1,583,510	-				+0.4
1,583,510	-				-0.9
1,583,510	-				-0.1
1,583,510	-				-0.3
1,583,510	-				+0.6
1,583,721	+		GFF4631	0.32	-0.9
1,583,721	+		GFF4631	0.32	+1.3
1,583,721	+		GFF4631	0.32	-0.3
1,583,721	+		GFF4631	0.32	-0.5
1,583,721	+		GFF4631	0.32	+0.4
1,583,722	-		GFF4631	0.32	+0.1
1,583,722	-		GFF4631	0.32	-0.2
1,583,722	-		GFF4631	0.32	+0.1
1,583,724	+		GFF4631	0.33	-1.4
1,583,725	-		GFF4631	0.33	+0.3
1,583,854	+		GFF4631	0.70	-0.0
1,583,888	-		GFF4631	0.79	-0.2
1,583,888	-		GFF4631	0.79	-0.4
1,583,959	+				-0.3
1,583,960	-				+0.3
1,584,374	+				+0.1
1,584,374	+				-0.5
1,584,374	+				-0.1
1,584,375	-				-0.1
1,584,375	-				-0.4
1,584,375	-				+0.3
1,584,409	-		GFF4633	0.10	-0.4
1,584,409	-		GFF4633	0.10	-0.1
1,584,581	-		GFF4633	0.37	-0.6
1,584,753	-		GFF4633	0.64	-0.4