Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4616

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
1,563,168	-				-0.5
1,563,390	+				+0.2
1,563,390	+				-0.5
1,563,390	+				-2.1
1,563,513	+				+0.8
1,563,513	+				+0.3
1,563,574	-				-1.3
1,563,845	+				+0.2
1,563,864	+				+0.8
1,563,890	-				+1.4
1,563,890	-				+0.9
1,563,890	-				-0.6
1,563,967	+				+0.3
1,564,006	+				+1.0
1,564,006	+				-0.2
1,564,007	-				+0.7
1,564,039	+				+0.1
1,564,087	-				-0.2
1,564,383	+		GFF4616	0.35	+1.0
1,564,384	-		GFF4616	0.35	+0.6
1,564,384	-		GFF4616	0.35	+0.2
1,564,773	+		GFF4616	0.77	-0.7
1,564,773	+		GFF4616	0.77	+0.0
1,564,773	+		GFF4616	0.77	+0.8
1,564,773	+		GFF4616	0.77	-0.4
1,564,773	+		GFF4616	0.77	+0.4
1,564,774	-		GFF4616	0.77	-0.0
1,564,774	-		GFF4616	0.77	-0.4
1,564,774	-		GFF4616	0.77	+0.3
1,564,887	+		GFF4616	0.89	+0.7
1,564,888	-		GFF4616	0.89	+0.2
1,565,055	+		GFF4617	0.13	-1.1
1,565,067	+		GFF4617	0.15	-0.1
1,565,067	+		GFF4617	0.15	-0.3
1,565,139	+		GFF4617	0.31	+0.1
1,565,305	-		GFF4617	0.68	-0.8
1,565,359	-		GFF4617	0.79	-0.8
1,565,359	-		GFF4617	0.79	-0.0
1,565,359	-		GFF4617	0.79	+0.0
1,565,558	-		GFF4618	0.12	-0.2
1,565,594	+		GFF4618	0.16	-0.0
1,565,594	+		GFF4618	0.16	+0.2
1,565,594	+		GFF4618	0.16	-0.3
1,565,594	+		GFF4618	0.16	-0.6
1,565,595	-		GFF4618	0.16	+0.5
1,565,599	+		GFF4618	0.16	-0.2
1,565,599	+		GFF4618	0.16	+0.5
1,565,599	+		GFF4618	0.16	-0.5
1,565,801	+		GFF4618	0.38	+0.2
1,565,801	+		GFF4618	0.38	+0.5
1,565,843	+		GFF4618	0.43	-0.1
1,565,844	-		GFF4618	0.43	-0.1
1,565,844	-		GFF4618	0.43	-1.1
1,565,877	-		GFF4618	0.46	+0.6
1,565,877	-		GFF4618	0.46	-0.1
1,565,888	+		GFF4618	0.48	-0.5
1,565,888	+		GFF4618	0.48	+0.9
1,565,888	+		GFF4618	0.48	-0.5
1,565,889	-		GFF4618	0.48	+0.1
1,565,889	-		GFF4618	0.48	-1.0
1,565,889	-		GFF4618	0.48	+0.2
1,565,889	-		GFF4618	0.48	+0.6
1,565,889	-		GFF4618	0.48	+0.7
1,565,889	-		GFF4618	0.48	-0.5
1,565,889	-		GFF4618	0.48	+0.3
1,565,889	-		GFF4618	0.48	-0.6
1,565,889	-		GFF4618	0.48	+0.2