Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF43

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
42,762	+		GFF42	0.46	-1.2
43,037	-		GFF42	0.70	+0.8
43,037	-		GFF42	0.70	-0.3
43,392	-				+0.1
44,559	+		GFF43	0.90	+1.1
44,560	-		GFF43	0.90	+0.0
44,628	+				-0.5
44,629	-				-0.0
44,760	-				+0.1
44,831	+		GFF44	0.17	+0.5
44,831	+		GFF44	0.17	-0.2
44,985	-		GFF44	0.36	-0.6
45,104	+		GFF44	0.50	+0.5
45,137	+		GFF44	0.53	+0.6
45,138	-		GFF44	0.54	+0.4
45,138	-		GFF44	0.54	-0.3