Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2325

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
1,208,982	+		GFF2323	0.52	-0.6
1,209,018	+		GFF2323	0.56	-1.0
1,209,018	+		GFF2323	0.56	-1.0
1,209,018	+		GFF2323	0.56	-1.5
1,209,019	-		GFF2323	0.56	-1.2
1,209,019	-		GFF2323	0.56	-0.1
1,209,019	-		GFF2323	0.56	+0.3
1,209,019	-		GFF2323	0.56	-1.3
1,209,019	-		GFF2323	0.56	-0.8
1,209,022	+		GFF2323	0.57	-2.0
1,209,022	+		GFF2323	0.57	-0.7
1,209,022	+		GFF2323	0.57	+0.1
1,209,022	+		GFF2323	0.57	-1.1
1,209,023	-		GFF2323	0.57	+0.2
1,209,023	-		GFF2323	0.57	-0.8
1,209,045	+		GFF2323	0.60	-0.2
1,209,045	+		GFF2323	0.60	-0.4
1,209,045	+		GFF2323	0.60	-1.0
1,209,045	+		GFF2323	0.60	-1.1
1,209,045	+		GFF2323	0.60	-0.5
1,209,045	+		GFF2323	0.60	-1.3
1,209,045	+		GFF2323	0.60	-2.0
1,209,046	-		GFF2323	0.60	-0.7
1,209,069	+		GFF2323	0.63	-0.6
1,209,144	+		GFF2323	0.73	-0.7
1,209,145	-		GFF2323	0.73	+0.6
1,209,177	+		GFF2323	0.77	+2.3
1,209,177	+		GFF2323	0.77	-0.7
1,209,231	+		GFF2323	0.84	+0.7
1,209,231	+		GFF2323	0.84	+1.1
1,209,231	+		GFF2323	0.84	-0.7
1,209,232	-		GFF2323	0.84	-0.3
1,209,232	-		GFF2323	0.84	-1.1
1,209,232	-		GFF2323	0.84	-2.1
1,209,384	+				+0.5
1,209,384	+				+0.5
1,209,545	+		GFF2324	0.27	+0.0
1,209,545	+		GFF2324	0.27	-0.1
1,209,545	+		GFF2324	0.27	+0.1
1,209,546	-		GFF2324	0.28	+0.6
1,209,563	+		GFF2324	0.31	-0.2
1,209,563	+		GFF2324	0.31	+0.1
1,209,564	-		GFF2324	0.31	+1.3
1,209,564	-		GFF2324	0.31	+0.1
1,209,564	-		GFF2324	0.31	-0.1
1,209,564	-		GFF2324	0.31	+0.2
1,209,600	-		GFF2324	0.37	-0.9
1,209,653	-		GFF2324	0.47	-0.4
1,209,872	+		GFF2324	0.87	+1.2
1,209,872	+		GFF2324	0.87	-0.6
1,209,872	+		GFF2324	0.87	+0.2
1,209,873	-		GFF2324	0.87	+0.2
1,209,873	-		GFF2324	0.87	-0.5
1,210,292	+		GFF2325	0.36	-0.5
1,210,293	-		GFF2325	0.37	+0.5
1,210,422	-		GFF2325	0.50	-2.9
1,210,502	+		GFF2325	0.58	-0.3
1,210,511	+		GFF2325	0.59	+0.1
1,210,511	+		GFF2325	0.59	+0.8
1,210,511	+		GFF2325	0.59	+0.4
1,210,512	-		GFF2325	0.60	-0.4
1,210,512	-		GFF2325	0.60	-0.4
1,210,728	-		GFF2325	0.82	-0.2
1,210,728	-		GFF2325	0.82	-0.5
1,211,191	+		GFF2326	0.29	+0.9
1,211,258	-		GFF2326	0.36	-0.6
1,211,258	-		GFF2326	0.36	+0.6
1,211,278	+		GFF2326	0.38	-0.7
1,211,278	+		GFF2326	0.38	-0.0
1,211,335	+		GFF2326	0.43	+0.3
1,211,393	-		GFF2326	0.49	-0.1
1,211,393	-		GFF2326	0.49	-2.0
1,211,599	+		GFF2326	0.70	+0.5
1,211,600	-		GFF2326	0.70	+0.5
1,211,767	+		GFF2326	0.87	-1.3
1,211,768	-		GFF2326	0.87	-0.4
1,211,768	-		GFF2326	0.87	-0.1